RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RASGRF2O14827 1237 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 MYBL2P10244 700 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 QARSP47897 775 aaKnown RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 Q3C1V9 767 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 SPIRE2Q8WWL2 714 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 ATP6V0A1Q93050 837 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 WRNIP1Q96S55 665 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.371e-7■■■■□ 26.1
VARS2-212ENST00000542001 NUP85Q9BW27 656 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 CALN1Q9BXU9 219 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 FGFBP2Q9BYJ0 223 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 RNF146Q9NTX7 359 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 TISP43B9A030 160 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 SOX5P35711 763 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 FMO5P49326 533 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 VTI1AQ96AJ9 217 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 EIF4E1BA6NMX2 242 aaKnown RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 ARHGEF2Q92974 986 aaKnown RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 POP1Q99575 1024 aaKnown RBP17.34■□□□□ 0.37
VARS2-212ENST00000542001 HOMER3Q9NSC5 361 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
VARS2-212ENST00000542001 PIK3R2O00459 728 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 PDXKO00764 312 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 RPA1P27694 616 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 DDR1Q08345 913 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 KLHDC7AQ5VTJ3 777 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 FBXW10Q5XX13 1052 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 HIBCHQ6NVY1 386 aaPredicted RBP17.33■□□□□ 0.37
VARS2-212ENST00000542001 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 ACP6Q9NPH0 428 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 ANAPC5Q9UJX4 755 aa17.33■□□□□ 0.37
VARS2-212ENST00000542001 F5H423 210 aaPredicted RBP17.33■□□□□ 0.36
VARS2-212ENST00000542001 ITGA4P13612 1032 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 HMGCS2P54868 508 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 CDO1Q16878 200 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 RINT1Q6NUQ1 792 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 ZWILCHQ9H900 591 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 NAGPAQ9UK23 515 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
VARS2-212ENST00000542001 LTN1O94822 1766 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 FAM86B1E9PN63 330 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 FAM86B2P0C5J1 330 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 MDM1Q8TC05 714 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 CPA5Q8WXQ8 436 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
VARS2-212ENST00000542001 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
VARS2-212ENST00000542001 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
VARS2-212ENST00000542001 IRAK1P51617 712 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 RHBDL3P58872 404 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 BAATQ14032 418 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 NUGGCQ68CJ6 796 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 CIAPIN1Q6FI81 312 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ZNF571Q7Z3V5 609 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 PALM2Q8IXS6 379 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 C7orf31Q8N865 590 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 JPH2Q9BR39 696 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 SSU72P8A0A1W2PR75 194 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 FOXN3O00409 490 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 ERFP50548 548 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 SESN3P58005 492 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 GPC5P78333 572 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ACTN3Q08043 901 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 MTMR2Q13614 643 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ZRSR2Q15696 482 aaKnown RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 ZNF564Q8TBZ8 553 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 CBWD1Q9BRT8 395 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ADAM22Q9P0K1 906 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 EML1O00423 815 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 P4HBP07237 508 aaKnown RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 FAM153BP0C7A2 387 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 PON1P27169 355 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 GIT2Q14161 759 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ECM1Q16610 540 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 NBPF9Q3BBW0 867 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 FAM153CQ494X1 144 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 TBC1D1Q86TI0 1168 aaPredicted RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 SRRM1Q8IYB3 904 aaKnown RBP17.32■□□□□ 0.36
VARS2-212ENST00000542001 RNF169Q8NCN4 708 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 MSTO1Q9BUK6 570 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 THAP2Q9H0W7 228 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 FAM153AQ9UHL3 310 aa17.32■□□□□ 0.36
VARS2-212ENST00000542001 ZNF233A6NK53 670 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms