RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 ATG16L1Q676U5 607 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 HES6Q96HZ4 224 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CYTH2Q99418 400 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP26Q9BXU7 913 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 TRIM54Q9BYV2 358 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CERS4Q9HA82 394 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PCDHGA4Q9Y5G9 962 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 ADGRA2Q96PE1 1338 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 POLRMTO00411 1230 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 HSPA4LO95757 839 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 AFPP02771 609 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 FGFR1P11362 822 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CHRNA3P32297 505 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 KCNB1Q14721 858 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
DMD-228ENST00000541735 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.73□□□□□ -1.33
DMD-228ENST00000541735 PHF21AQ96BD5 680 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 GBP5Q96PP8 586 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 L3MBTL1Q9Y468 752 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 DTNAQ9Y4J8 743 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 A0A0D9SFI3 127 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 H0Y626 953 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 TNNI3P19429 210 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 MRPS25P82663 173 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 RBM23Q86U06 439 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 FAM160B2Q86V87 743 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SLC44A2Q8IWA5 706 aaPredicted RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 RNF149Q8NC42 400 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SLC44A5Q8NCS7 719 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CERKQ8TCT0 537 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 FOPNLQ96NB1 174 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SENP6Q9GZR1 1112 aaPredicted RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 DHX36Q9H2U1 1008 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 RUBCNLQ9H714 662 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 ARAP3Q8WWN8 1544 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 H0YC42 278 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 H2AFZP0C0S5 128 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 GSPT1P15170 499 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 TAC1P20366 129 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 MXI1P50539 228 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PLTPP55058 493 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 C10orf120Q5SQS8 335 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 H2AFVQ71UI9 128 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PATL1Q86TB9 770 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 VPS39Q96JC1 886 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PCDHGB4Q9UN71 923 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 PCDHA8Q9Y5H6 950 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 AK9Q5TCS8 1911 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 A0A1W2PP64 1363 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 MEFVO15553 781 aaPredicted RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 EFCAB14O75071 495 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 MT-ND3P03897 115 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CA4P22748 312 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CLMNQ96JQ2 1002 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 BCL2L14Q9BZR8 327 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 CHCHD3Q9NX63 227 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 ZKSCAN5Q9Y2L8 839 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 EFCAB5A4FU69 1503 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ORC4O43929 436 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NDUFS2O75306 463 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 FTCDO95954 541 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PLA2G4BP0C869 781 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 RLBP1P12271 317 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 SULT1E1P49888 294 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 EIF4A1P60842 406 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 NUDCD3Q8IVD9 361 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NOSTRINQ8IVI9 506 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 MLKLQ8NB16 471 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NAF1Q96HR8 494 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 COA1Q9GZY4 146 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 RNF208Q9H0X6 261 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 EPC1Q9H2F5 836 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ANTXR1Q9H6X2 564 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 AAASQ9NRG9 546 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 CLIC4Q9Y696 253 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 A2MP01023 1474 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 UBE4BO95155 1302 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PASKQ96RG2 1323 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 C5orf58C9J3I9 102 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TRAPPC3O43617 180 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PDE8BO95263 885 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NCALDP61601 193 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 DHX9Q08211 1270 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 TAF1BQ53T94 588 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 RERGLQ9H628 205 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 SMYD3Q9H7B4 428 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 SEL1LQ9UBV2 794 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TRIM10Q9UDY6 481 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PPP1R9AQ9ULJ8 1098 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PCDHA4Q9UN74 947 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ZNF197O14709 1029 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms