RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MTHFD1LQ6UB35 978 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 CEP68Q76N32 757 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 ECHDC2Q86YB7 292 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 MAP4K1Q92918 833 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 CUL5Q93034 780 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 LOXL4Q96JB6 756 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 ZDHHC7Q9NXF8 308 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 CNPP09543 421 aaKnown RBP10.84□□□□□ -0.67
YBX3-211ENST00000541351 SKIP12755 728 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
YBX3-211ENST00000541351 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
YBX3-211ENST00000541351 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 ALX1Q15699 326 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 ZMYM1Q5SVZ6 1142 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 PLPPR4Q7Z2D5 763 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
YBX3-211ENST00000541351 CHRDQ9H2X0 955 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 FRMPD4Q14CM0 1322 aa10.84□□□□□ -0.67
YBX3-211ENST00000541351 FRYQ5TBA9 3013 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 SPEGQ15772 3267 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 A0A0U1RQF3 1178 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 GSTTP1A0A1W2PQM5 241 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 OPLAHO14841 1288 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 ZZEF1O43149 2961 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 FSHRP23945 695 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 TARSP26639 723 aaKnown RBP10.83□□□□□ -0.68
YBX3-211ENST00000541351 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
YBX3-211ENST00000541351 SEMA3FQ13275 785 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 DSC3Q14574 896 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 PLCB4Q15147 1175 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 SOWAHCQ53LP3 525 aaPredicted RBP10.83□□□□□ -0.68
YBX3-211ENST00000541351 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 LONP2Q86WA8 852 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 MIER1Q8N108 512 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 HELQQ8TDG4 1101 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 GATA6Q92908 595 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 PHF20Q9BVI0 1012 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 MTF2Q9Y483 593 aaPredicted RBP10.83□□□□□ -0.68
YBX3-211ENST00000541351 RALGAPA1Q6GYQ0 2036 aa10.83□□□□□ -0.68
YBX3-211ENST00000541351 MYH6P13533 1939 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 COL1A2P08123 1366 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 HBP1O60381 514 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 ZIC2O95409 532 aaPredicted RBP10.82□□□□□ -0.68
YBX3-211ENST00000541351 MS4A1P11836 297 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 KLRC1P26715 233 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 CXCL12P48061 93 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 STAT5BP51692 787 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 AK2P54819 239 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 WTAPQ15007 396 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 CLLU1OSQ5K130 101 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 SMARCC2Q8TAQ2 1214 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
YBX3-211ENST00000541351 OSMRQ99650 979 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
YBX3-211ENST00000541351 RNF19AQ9NV58 838 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 PCDHGA5Q9Y5G8 931 aa10.82□□□□□ -0.68
YBX3-211ENST00000541351 C2orf16Q68DN1 1984 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 PAPLNO95428 1278 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 GALTP07902 379 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 TDGF1P13385 188 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 CEACAM1P13688 526 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 KCNA2P16389 499 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 TMOD1P28289 359 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 CREMQ03060 361 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 C19orf57Q0VDD7 668 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 MTMR1Q13613 665 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 KIZQ2M2Z5 673 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 PDZD3Q86UT5 571 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 URGCPQ8TCY9 931 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 TMEM40Q8WWA1 233 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 DNASE1L2Q92874 299 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 FGF14Q92915 247 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 FAM193BQ96PV7 902 aaPredicted RBP10.81□□□□□ -0.68
YBX3-211ENST00000541351 MAP7D2Q96T17 732 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 SCNM1Q9BWG6 230 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
YBX3-211ENST00000541351 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 NT5C3AQ9H0P0 336 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 SLC9A2Q9UBY0 812 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 NEUROG3Q9Y4Z2 214 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 ZMYM6O95789 1325 aa10.81□□□□□ -0.68
YBX3-211ENST00000541351 ALDH2P05091 517 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 SSBP05455 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
YBX3-211ENST00000541351 CD72P21854 359 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 ZNF484Q5JVG2 852 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 FAM160B1Q5W0V3 765 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 C1orf228Q6PIY5 440 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 PARM1Q6UWI2 310 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 FAM160A2Q8N612 972 aaPredicted RBP10.8□□□□□ -0.68
YBX3-211ENST00000541351 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms