RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 FAM20AQ96MK3 541 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 RAD9AQ99638 391 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 HSD17B14Q9BPX1 270 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 LXNQ9BS40 222 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 ZBED2Q9BTP6 218 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 NIFKQ9BYG3 293 aaKnown RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 POLD4Q9HCU8 107 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
LMO3-220ENST00000539232 ST3GAL5Q9UNP4 418 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 PCDHB6Q9Y5E3 794 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 TET1Q8NFU7 2136 aa8.12□□□□□ -1.11
LMO3-220ENST00000539232 COL1A2P08123 1366 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 PP2D1A8MPX8 630 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 NEMFO60524 1076 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 MED24O75448 989 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 PARNO95453 639 aaKnown RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 TPM2P07951 284 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 GCFC2P16383 781 aaKnown RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 GJB2P29033 226 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 SFNP31947 248 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 PSMC5P62195 406 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 ZXDAP98168 799 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 EPHA7Q15375 998 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 CALCRLQ16602 461 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 XKR3Q5GH77 459 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 RSPH3Q86UC2 560 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 TPH2Q8IWU9 490 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 SP7Q8TDD2 431 aaPredicted RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 PIGOQ8TEQ8 1089 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 EIF2AK1Q9BQI3 630 aaKnown RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 TTC12Q9H892 705 aaPredicted RBP8.11□□□□□ -1.11
LMO3-220ENST00000539232 MINDY3Q9H8M7 445 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 NRBP2Q9NSY0 501 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 FOXD4L1Q9NU39 408 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
LMO3-220ENST00000539232 SIP14410 1827 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 KDM3AQ9Y4C1 1321 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 MEIS3P2A8K0S8 358 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 TBX3O15119 743 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 MAFO75444 373 aaPredicted RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 AMHP03971 560 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 FGFR1P11362 822 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.11
LMO3-220ENST00000539232 CDC25AP30304 524 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 TECP42680 631 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 QARSP47897 775 aaKnown RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 GPC3P51654 580 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 ERVK-21P61565 698 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 PAK2Q13177 524 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 TRIM29Q14134 588 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 LONRF3Q496Y0 759 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 PAN2Q504Q3 1202 aaKnown RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 TTC38Q5R3I4 469 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 FAM102BQ5T8I3 360 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 IER5Q5VY09 327 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 NME8Q8N427 588 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 RDM1Q8NG50 284 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 ASAP3Q8TDY4 903 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 PABPC5Q96DU9 382 aaKnown RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 FAM167AQ96KS9 214 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 MAP7D2Q96T17 732 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 ADAM2Q99965 735 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 FOXP1Q9H334 677 aaPredicted RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 GPRC5CQ9NQ84 441 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 CYP26B1Q9NR63 512 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 AKT3Q9Y243 479 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 MRPL42Q9Y6G3 142 aaKnown RBP8.1□□□□□ -1.11
LMO3-220ENST00000539232 SCN5AQ14524 2016 aa8.1□□□□□ -1.11
LMO3-220ENST00000539232 KIAA1217Q5T5P2 1943 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 A0A087WZ62 844 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 C9IYK1 514 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 MAGEB2O15479 319 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 MARCH6O60337 910 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 RPS6KA5O75582 802 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 DGKIO75912 1065 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 CSPG5O95196 566 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 DARSP14868 501 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 ATF7P17544 494 aaPredicted RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 YWHABP31946 246 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 CRYBB1P53674 252 aaPredicted RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 HMGN5P82970 282 aaKnown RBP8.09□□□□□ -1.11
LMO3-220ENST00000539232 GRIN1Q05586 938 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 SIGLEC14Q08ET2 396 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 CUL4AQ13619 759 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 CAMK1Q14012 370 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
LMO3-220ENST00000539232 POTEGQ6S5H5 508 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms