RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 APC2O95996 2303 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 KDM3AQ9Y4C1 1321 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 MYMKA6NI61 221 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 RFXAPO00287 272 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 ZNF862O60290 1169 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 SLITRK3O94933 977 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 FGFR1P11362 822 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 GATMP50440 423 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 CCDC181Q5TID7 509 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 KRBA2Q6ZNG9 492 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 AUTS2Q8WXX7 1259 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 HAS1Q92839 578 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 B3GALT6Q96L58 329 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 ZNF830Q96NB3 372 aaPredicted RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 SRPRBQ9Y5M8 271 aaKnown RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 UBXN1Q04323 297 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 GOLGA8FQ08AF8 430 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 GOLGA8DPQ0D2H9 430 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 SKOR2Q2VWA4 1001 aaPredicted RBP7.91□□□□□ -1.14
MSH6-209ENST00000538136 KMT5BQ4FZB7 885 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ZNF618Q5T7W0 954 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ZNF365Q70YC5 407 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ATP8B4Q8TF62 1192 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 GPR20Q99678 358 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 NOC4LQ9BVI4 516 aaKnown RBP7.91□□□□□ -1.14
MSH6-209ENST00000538136 GOLGA2P5Q9HBQ8 144 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 PRUNE2Q8WUY3 3088 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 EPB41P11171 864 aaKnown RBP7.91□□□□□ -1.14
MSH6-209ENST00000538136 SFPQP23246 707 aaKnown RBP eCLIP7.91□□□□□ -1.14
MSH6-209ENST00000538136 TRAPPC10P48553 1259 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 TYRO3Q06418 890 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 BFSP1Q12934 665 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 PPP2R5AQ15172 486 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 CNNM4Q6P4Q7 775 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 MCPH1Q8NEM0 835 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 TRPV1Q8NER1 839 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 SEPT8Q92599 483 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 RNF34Q969K3 372 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 FAM149B1Q96BN6 582 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 JPH2Q9BR39 696 aaPredicted RBP7.91□□□□□ -1.14
MSH6-209ENST00000538136 PI4K2AQ9BTU6 479 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 LRRC27Q9C0I9 530 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ST3GAL5Q9UNP4 418 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 PER2O15055 1255 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ACTN1P12814 892 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 CIITAP33076 1130 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 LAMTOR4Q0VGL1 99 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 DPCR1Q3MIW9 517 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 TEX2Q8IWB9 1127 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ANKS1AQ92625 1134 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 PDE11AQ9HCR9 933 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 ENTPD7Q9NQZ7 604 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
MSH6-209ENST00000538136 TMEM63CQ9P1W3 806 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.91□□□□□ -1.14
MSH6-209ENST00000538136 SNX9Q9Y5X1 595 aa7.91□□□□□ -1.14
MSH6-209ENST00000538136 GSTTP1A0A1W2PQM5 241 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 ADCY6O43306 1168 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 DGAT1O75907 488 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 FGRP09769 529 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 TGFB3P10600 412 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 STK4Q13043 487 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 IKBKEQ14164 716 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 ZNF792Q3KQV3 632 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 WDR44Q5JSH3 913 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 MCTP2Q6DN12 878 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 REM2Q8IYK8 340 aaPredicted RBP7.9□□□□□ -1.14
MSH6-209ENST00000538136 TMEM199Q8N511 208 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 PAGE5Q96GU1 130 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 INPP4AQ96PE3 977 aaPredicted RBP7.9□□□□□ -1.14
MSH6-209ENST00000538136 RIT2Q99578 217 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 CDHR5Q9HBB8 845 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 EXOC7Q9UPT5 735 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 FGBP02675 491 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 ITGA4P13612 1032 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
MSH6-209ENST00000538136 RRAGAQ7L523 313 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 HELQQ8TDG4 1101 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 PXYLP1Q8TE99 480 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 RMND1Q9NWS8 449 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 MORF4L1Q9UBU8 362 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 GJD2Q9UKL4 321 aa7.9□□□□□ -1.14
MSH6-209ENST00000538136 TNS1Q9HBL0 1735 aaKnown RBP7.9□□□□□ -1.14
MSH6-209ENST00000538136 NUP188Q5SRE5 1749 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 CMA1P23946 247 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 RPL13P26373 211 aaKnown RBP7.9□□□□□ -1.15
MSH6-209ENST00000538136 CTNNB1P35222 781 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 RARRES1P49788 294 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 SCNN1GP51170 649 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 ATP2C1P98194 919 aaPredicted RBP7.9□□□□□ -1.15
MSH6-209ENST00000538136 CYP27A1Q02318 531 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 ANO5Q75V66 913 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 ZNF653Q96CK0 615 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 MTA3Q9BTC8 594 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 ALDH8A1Q9H2A2 487 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms