RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 USP11P51784 963 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 TAGLNQ01995 201 aaKnown RBP10.38□□□□□ -0.75
UBB-204ENST00000535788 TAP1Q03518 808 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 FAM160A1Q05DH4 1040 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 ST3GAL1Q11201 340 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 PLCB4Q15147 1175 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 MIS18BP1Q6P0N0 1132 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 CNKSR3Q6P9H4 555 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 RUFY4Q6ZNE9 571 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 PLPPR4Q7Z2D5 763 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 KRT25Q7Z3Z0 450 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 SPRED2Q7Z698 418 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 KRT77Q7Z794 578 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 LCA5Q86VQ0 697 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 CCDC60Q8IWA6 550 aaPredicted RBP10.38□□□□□ -0.75
UBB-204ENST00000535788 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 WASF1Q92558 559 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 FAM210AQ96ND0 272 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 SLC9A7Q96T83 725 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 PHF20Q9BVI0 1012 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 MUC3BQ9H195 1237 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 TUBE1Q9UJT0 475 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
UBB-204ENST00000535788 C5orf42Q9H799 3197 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 IGKV6D-21A0A0A0MT36 114 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 PABPN1LA6NDY0 278 aaKnown RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 MSH4O15457 936 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 DCXO43602 365 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 FAM163BP0C2L3 166 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 FDPSP14324 419 aaKnown RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 INSRRP14616 1297 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 RFC5P40937 340 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 KCNJ6P48051 423 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 SLC26A2P50443 739 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 KRT76Q01546 638 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 SATB1Q01826 763 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
UBB-204ENST00000535788 INF2Q27J81 1249 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 HSP90B2PQ58FF3 399 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 FAM160B1Q5W0V3 765 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 ABHD15Q6UXT9 468 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 CHPFQ8IZ52 775 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 NSUN7Q8NE18 718 aaKnown RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 TRAPPC12Q8WVT3 735 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 KIF2CQ99661 725 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 UBE2ZQ9H832 354 aaPredicted RBP10.37□□□□□ -0.75
UBB-204ENST00000535788 ZNF302Q9NR11 478 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 PTPRSQ13332 1948 aa10.37□□□□□ -0.75
UBB-204ENST00000535788 SIP14410 1827 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 ABHD14A-ACY1A0A1B0GW23 586 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 MBLAC1A4D2B0 266 aaPredicted RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 RRN3P2A6NIE6 340 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 CHMP2AO43633 222 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 GAS7O60861 476 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 CASP2P42575 452 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 WDR5P61964 334 aaKnown RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 Q4G0T1 1027 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 MARCH8Q5T0T0 291 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 LRCH2Q5VUJ6 765 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 LARP1BQ659C4 914 aaKnown RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 SWSAP1Q6NVH7 229 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 RSPH3Q86UC2 560 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 SMAP1Q8IYB5 467 aaPredicted RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 CHCHD4Q8N4Q1 142 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 TEX19Q8NA77 164 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 ATP8B4Q8TF62 1192 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 GDPD5Q8WTR4 605 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 SLC5A5Q92911 643 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 GJA10Q969M2 543 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 RIT2Q99578 217 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 ARPC5LQ9BPX5 153 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 TEKT3Q9BXF9 490 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 SUDS3Q9H7L9 328 aaPredicted RBP10.36□□□□□ -0.75
UBB-204ENST00000535788 LIMCH1Q9UPQ0 1083 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 SAMM50Q9Y512 469 aa10.36□□□□□ -0.75
UBB-204ENST00000535788 MYH9P35579 1960 aaKnown RBP10.35□□□□□ -0.75
UBB-204ENST00000535788 MICAL3Q7RTP6 2002 aa10.35□□□□□ -0.75
UBB-204ENST00000535788 CYP3A7-CYP3A51PA0A087WV96 503 aa10.35□□□□□ -0.75
UBB-204ENST00000535788 CCDC163A0A0D9SF12 145 aa10.35□□□□□ -0.75
UBB-204ENST00000535788 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
UBB-204ENST00000535788 KIF28PB7ZC32 967 aa10.35□□□□□ -0.75
UBB-204ENST00000535788 HBP1O60381 514 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms