RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FAM189BP81408 668 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 INF2Q27J81 1249 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 ADGRD2Q7Z7M1 963 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 RNF135Q8IUD6 432 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 HACE1Q8IYU2 909 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 SMRP1Q8NCR6 262 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 LENG9Q96B70 501 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 ZNF668Q96K58 619 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 RPGRIP1Q96KN7 1286 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 CEP170P1Q96L14 293 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 PHF7Q9BWX1 381 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 BDP1A6H8Y1 2624 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 GAS2O43903 313 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 NR1I2O75469 434 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 ERLIN2O94905 339 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 P4HBP07237 508 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 DNAJB1P25685 340 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 RFC5P40937 340 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 CAMK1Q14012 370 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 TOB2Q14106 344 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 DSC3Q14574 896 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 PPP4R3AQ6IN85 833 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 LLGL2Q6P1M3 1020 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 HELQQ8TDG4 1101 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 CASD1Q96PB1 797 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 PRRX2Q99811 253 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 ADAMTS10Q9H324 1103 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 MUTYHQ9UIF7 546 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 USP15Q9Y4E8 981 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 STK36Q9NRP7 1315 aa14.83□□□□□ -0.04
CLSTN3-205ENST00000535452 A0A087WZ62 844 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 TBX3O15119 743 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 ZNF862O60290 1169 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 ZC3H11AO75152 810 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 KRT2P35908 639 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 TFDP1Q14186 410 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 HERC4Q5GLZ8 1057 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 KHSRPQ92945 711 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 RIPOR3Q96MK2 946 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 FDXACB1Q9BRP7 624 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 CYP26B1Q9NR63 512 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 KANSL3Q9P2N6 904 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 INPP5FQ9Y2H2 1132 aa14.82□□□□□ -0.04
CLSTN3-205ENST00000535452 RBAK-RBAKDNI3L0D1 243 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ASAP2O43150 1006 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 MAFO75444 373 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 PHKA2P46019 1235 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ANAPC15P60006 121 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ERVFC1P60507 584 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 CBX2Q14781 532 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 UGCGQ16739 394 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ANKRD54Q6NXT1 300 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 PPFIBP1Q86W92 1011 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 CNNM3Q8NE01 707 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 EDAQ92838 391 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 LARP6Q9BRS8 491 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 EMILIN2Q9BXX0 1053 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 CWH43Q9H720 699 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ZSWIM4Q9H7M6 989 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 UBN1Q9NPG3 1134 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 CLEC1BQ9P126 229 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 DPP7Q9UHL4 492 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 KCNJ14Q9UNX9 436 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 COL4A3BPQ9Y5P4 624 aa14.81□□□□□ -0.04
CLSTN3-205ENST00000535452 BRWD1Q9NSI6 2320 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 FGFR4P22455 802 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 BCAR1P56945 870 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 ITIH3Q06033 890 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 PCBP1Q15365 356 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 EPHA7Q15375 998 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 SRGAP1Q7Z6B7 1085 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 LINC01465Q8N7H1 131 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 ETNPPLQ8TBG4 499 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 GJA10Q969M2 543 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 PBXIP1Q96AQ6 731 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 MTRQ99707 1265 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 PHF20Q9BVI0 1012 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 TRIM6Q9C030 488 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 GBP3Q9H0R5 595 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 C11orf16Q9NQ32 467 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 FAM105AQ9NUU6 356 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 DZANK1Q9NVP4 752 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 SSX2IPQ9Y2D8 614 aa14.8□□□□□ -0.04
CLSTN3-205ENST00000535452 XIRP2A4UGR9 3374 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 FSCN2O14926 492 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 CXCL14O95715 111 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 YWHABP31946 246 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 MTHFRP42898 656 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms