RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 MAPTP10636 758 aaKnown RBP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 PSEN2P49810 448 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 STX17P56962 302 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 SMAD3P84022 425 aaKnown RBP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 FANCCQ00597 558 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 EPM2AIP1Q7L775 607 aaPredicted RBP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 KAT2BQ92831 832 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 PARVGQ9HBI0 331 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 SLC39A2Q9NP94 309 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF215Q9UL58 517 aaPredicted RBP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 EMSYQ7Z589 1322 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 H3BRB1 525 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZBTB39O15060 712 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 CAND2O75155 1236 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 GNAT1P11488 350 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ATP1A3P13637 1013 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ITGB8P26012 769 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 MAPK7Q13164 816 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ALCAMQ13740 583 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 MFSD10Q14728 455 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ANO5Q75V66 913 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 SFR1Q86XK3 245 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM114A1Q8IWE2 563 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 C7orf31Q8N865 590 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 KCNN1Q92952 543 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 CCDC43Q96MW1 224 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 FIZ1Q96SL8 496 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 GPR20Q99678 358 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 TUT1Q9H6E5 874 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF302Q9NR11 478 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
LDLRAD3-206ENST00000534091 A0A1B0GTH6 734 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 LRRC10BA6NIK2 292 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 GOLGA6L6A8MZA4 724 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 BACH1O14867 736 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 DGAT1O75907 488 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 OATP04181 439 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 LGALS2P05162 132 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 TPM3P06753 285 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PTGS1P23219 599 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 EEF1GP26641 437 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 HOXC8P31273 242 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 SLC26A2P50443 739 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PMS1P54277 932 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PRKCEQ02156 737 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PTK7Q13308 1070 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 SHHQ15465 462 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PTGISQ16647 500 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 KIAA0753Q2KHM9 967 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 XKR9Q5GH70 373 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 APTXQ7Z2E3 356 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZC3H3Q8IXZ2 948 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 DAW1Q8N136 415 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 MCPH1Q8NEM0 835 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 HPS3Q969F9 1004 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM167AQ96KS9 214 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 DRC1Q96MC2 740 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 PCYT2Q99447 389 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 TSG101Q99816 390 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 XPO4Q9C0E2 1151 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 LIMA1Q9UHB6 759 aaKnown RBP11.09□□□□□ -0.63
LDLRAD3-206ENST00000534091 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms