RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CCDC25Q86WR0 208 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 OSBPL1AQ9BXW6 950 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZFP69BQ9UJL9 534 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SNX24Q9Y343 169 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 POTECB2RU33 542 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ALADP13716 330 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ATP6V1C1P21283 382 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 FBLN1P23142 703 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GRK2P25098 689 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ECE1P42892 770 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RAD23BP54727 409 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GRIN1Q05586 938 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GRM1Q13255 1194 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 NFRKBQ6P4R8 1299 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ADGRG6Q86SQ4 1221 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ANKRD42Q8N9B4 389 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RDM1Q8NG50 284 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ARL8AQ96BM9 186 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 LRRC39Q96DD0 335 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 NRBF2Q96F24 287 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 UPF3AQ9H1J1 476 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 C8orf4Q9NR00 106 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 INTS13Q9NVM9 706 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CHCHD3Q9NX63 227 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ANKFY1Q9P2R3 1169 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ABCA6Q8N139 1617 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KPNA7A9QM74 516 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GYG2O15488 501 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ADSLP30566 484 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 SLC1A4P43007 532 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CARSP49589 748 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 PRUNE1Q86TP1 453 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SLC13A5Q86YT5 568 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 SCFD2Q8WU76 684 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 VCPIP1Q96JH7 1222 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 MAF1Q9H063 256 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 PSMC3IPQ9P2W1 217 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ATRNO75882 1429 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 PMM2O15305 246 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CAPN15O75808 1086 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ATP6V1G2O95670 118 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SYF2O95926 243 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 FTCDO95954 541 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 LDHAP00338 332 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 INHBAP08476 426 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 UCHL3P15374 230 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CDC27P30260 824 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SOX5P35711 763 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ERVK-9P63128 1117 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RASGRF1Q13972 1273 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KRT81Q14533 505 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SEC23AQ15436 765 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KNOP1Q1ED39 458 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 PROSER3Q2NL68 480 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 LRRC24Q50LG9 513 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RARS2Q5T160 578 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 PDXDC2PQ6P474 469 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 FOXP4Q8IVH2 680 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 XXYLT1Q8NBI6 393 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 TMEM35BQ8NCS4 154 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 DLG3Q92796 817 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ATP6V0A1Q93050 837 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ITPKCQ96DU7 683 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KAZALD1Q96I82 304 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 TRIM31Q9BZY9 425 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 VPS33BQ9H267 617 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 BHMT2Q9H2M3 363 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 C17orf75Q9HAS0 396 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 PIH1D3Q9NQM4 214 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 EHD2Q9NZN4 543 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZNF212Q9UDV6 495 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 MRPL11Q9Y3B7 192 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 GMNNO75496 209 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NR3C1P04150 777 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KRT7P08729 469 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KRT16P08779 473 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 MAPTP10636 758 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 P4HA1P13674 534 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KLRC1P26715 233 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PHKA1P46020 1223 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PPP4CP60510 307 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NAB1Q13506 487 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SLFN12LQ6IEE8 588 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CROCCP3Q8IVE0 287 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DNAJC10Q8IXB1 793 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.32□□□□□ -1.72
SOX6-217ENST00000533870 CCDC33Q8N5R6 958 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 MCPH1Q8NEM0 835 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ARHGEF1Q92888 912 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 TLCD1Q96CP7 247 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 OPTNQ96CV9 577 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 FNBP1Q96RU3 617 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 MYL10Q9BUA6 226 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CSDE1O75534 798 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 TTC4O95801 387 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms