RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MAGEB5Q9BZ81 275 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 NDST4Q9H3R1 872 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 XAB2Q9HCS7 855 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 FNDC3AQ9Y2H6 1198 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 ECEL1O95672 775 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 NR3C1P04150 777 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 TTC23LQ6PF05 361 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 GLB1LQ6UWU2 654 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 SPATA2LQ8IUW3 424 aaPredicted RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 GPD1LQ8N335 351 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 FAM133AQ8N9E0 248 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 VPS39Q96JC1 886 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 PBKQ96KB5 322 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 TPX2Q9ULW0 747 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 CSF1RP07333 972 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 STX1BP61266 288 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 BTBD8Q5XKL5 378 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 IFT43Q96FT9 208 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 BAIAP2L1Q9UHR4 511 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 FAM170AA1A519 330 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 A8MXQ7 604 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 PRKCBP05771 671 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 CASP14P31944 242 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 DUOXA2Q1HG44 320 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 SFI1A8K8P3 1242 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 SMIM24O75264 130 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 NDUFB10O96000 172 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 SCP2P22307 547 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 PAPOLAP51003 745 aaKnown RBP11.48□□□□□ -0.57
COLCA1-203ENST00000532918 ZNF543Q08ER8 600 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 JADE1Q6IE81 842 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
COLCA1-203ENST00000532918 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 DPH5Q9H2P9 285 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 ZC3H13Q5T200 1668 aaKnown RBP11.48□□□□□ -0.57
COLCA1-203ENST00000532918 DIP2AQ14689 1571 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 UBE4BO95155 1302 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 POTEMA6NI47 508 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 TTI1O43156 1089 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 CDC25AP30304 524 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 SDC4P31431 198 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 ST8SIA6P61647 398 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 KLC3Q6P597 504 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 CYB5R4Q7L1T6 521 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
COLCA1-203ENST00000532918 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
COLCA1-203ENST00000532918 ADAM22Q9P0K1 906 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 NMT2O60551 498 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 NR3C2P08235 984 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 CYP27A1Q02318 531 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 STILQ15468 1287 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 RNF149Q8NC42 400 aa11.48□□□□□ -0.57
COLCA1-203ENST00000532918 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 APBA1Q02410 837 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 DCP1BQ8IZD4 617 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 TAB3Q8N5C8 712 aaPredicted RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 ANKRD42Q8N9B4 389 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 PCSK9Q8NBP7 692 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 RBM41Q96IZ5 413 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 HOXA2O43364 376 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 IRX4P78413 519 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 BFSP2Q13515 415 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 PSMD6Q15008 389 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 C16orf86Q6ZW13 317 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 TDRD7Q8NHU6 1098 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 AGO2Q9UKV8 859 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 PCDHB7Q9Y5E2 793 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 MANSC4A6NHS7 340 aaPredicted RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 TBX3O15119 743 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 LUC7L3O95232 432 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 CD4P01730 458 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 ITGA4P13612 1032 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 DYNLT1P63172 113 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 BASP1P80723 227 aaKnown RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 DACT3Q96B18 629 aaPredicted RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
COLCA1-203ENST00000532918 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 SYNGAP1Q96PV0 1343 aa11.47□□□□□ -0.57
COLCA1-203ENST00000532918 EYA4O95677 639 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms