RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	2e-9	■■■□□ 18.9
NXF1-209	ENST00000531474	COL1A2	P08123	1366 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ARHGEF35	A5YM69	484 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ZBTB42	B2RXF5	422 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ZBTB39	O15060	712 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	TREH	O43280	583 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	KLRC4	O43908	158 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	CYP2C9	P11712	490 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	CD44	P16070	742 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	CCNE1	P24864	410 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	EEF1G	P26641	437 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	PRCP	P42785	496 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	NPEPPS	P55786	919 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ASIC1	P78348	528 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	GRB10	Q13322	594 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	TRIM14	Q14142	442 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ECM1	Q16610	540 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	TMEM119	Q4V9L6	283 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	PPFIBP1	Q86W92	1011 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	RAD54L	Q92698	747 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	DPF3	Q92784	378 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ZBTB10	Q96DT7	871 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	TOX2	Q96NM4	488 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	PNMA5	Q96PV4	448 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	NAA15	Q9BXJ9	866 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	SAMSN1	Q9NSI8	373 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	ANKEF1	Q9NU02	776 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	LIMA1	Q9UHB6	759 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	PYCARD	Q9ULZ3	195 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	CTNND2	Q9UQB3	1225 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	CENPF	P49454	3210 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	KIAA0100	Q14667	2235 aa	Known RBP	10.43	□□□□□ -0.74
NXF1-209	ENST00000531474	SCN10A	Q9Y5Y9	1956 aa		10.43	□□□□□ -0.74
NXF1-209	ENST00000531474		E9PMD0	336 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	EVI5	O60447	810 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	STX10	O60499	249 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	C22orf31	O95567	290 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	CD4	P01730	458 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	SSB	P05455	408 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	CLTB	P09497	229 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	KLRC1	P26715	233 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	HOXC8	P31273	242 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	TBC1D8B	Q0IIM8	1120 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	FAAP100	Q0VG06	881 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	TARBP2	Q15633	366 aa	Known RBP	10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	MARCH8	Q5T0T0	291 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	MTHFD1L	Q6UB35	978 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	RUFY4	Q6ZNE9	571 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	CCDC65	Q8IXS2	484 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	METTL13	Q8N6R0	699 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	IQCD	Q96DY2	449 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	CCDC51	Q96ER9	411 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	CYP26B1	Q9NR63	512 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	TMEM39A	Q9NV64	488 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	DNM3	Q9UQ16	869 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	PAXBP1	Q9Y5B6	917 aa		10.42	□□□□□ -0.74
NXF1-209	ENST00000531474	ITIH6	Q6UXX5	1313 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	N4BP3	O15049	544 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	MAGEB2	O15479	319 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	ZSCAN12	O43309	604 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	USO1	O60763	962 aa	Known RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	EYA4	O95677	639 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	CASP1	P29466	404 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	RARRES1	P49788	294 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	POLG	P54098	1239 aa	Predicted RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	STX17	P56962	302 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	ADAM17	P78536	824 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	CCZ1B	P86790	482 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	CCZ1	P86791	482 aa	Predicted RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	LRMP	Q12912	555 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	TBX2	Q13207	712 aa	Predicted RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PTK7	Q13308	1070 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	TCP11X2	Q5H9J9	407 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	TAF2	Q6P1X5	1199 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	KCNK18	Q7Z418	384 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	SERINC5	Q86VE9	423 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	GUF1	Q8N442	669 aa	Known RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	RETREG2	Q8NC44	543 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	SLC7A3	Q8WY07	619 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	P2RX5	Q93086	422 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PANX2	Q96RD6	677 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	MED15	Q96RN5	788 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	BHMT2	Q9H2M3	363 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	TMX1	Q9H3N1	280 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	SUGCT	Q9HAC7	445 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PDLIM7	Q9NR12	457 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	BLOC1S4	Q9NUP1	217 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PRKAG2	Q9UGJ0	569 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	DBR1	Q9UK59	544 aa	Known RBP	10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	TBX21	Q9UL17	535 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PPME1	Q9Y570	386 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	PCDHA2	Q9Y5H9	948 aa		10.41	□□□□□ -0.74
NXF1-209	ENST00000531474	GOLGA6L9	A6NEM1	432 aa		10.4	□□□□□ -0.74
NXF1-209	ENST00000531474	KCNJ18	B7U540	433 aa		10.4	□□□□□ -0.74
NXF1-209	ENST00000531474	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.4	□□□□□ -0.74
NXF1-209	ENST00000531474	ARHGAP6	O43182	974 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms