RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 MCM10Q7L590 875 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 TTC5Q8N0Z6 440 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 IL17REQ8NFR9 667 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 TRMT2BQ96GJ1 504 aaKnown RBP6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 CDC6Q99741 560 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 TSPYL4Q9UJ04 414 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 MRPS23Q9Y3D9 190 aaKnown RBP6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 CACNA1FO60840 1977 aa6.96□□□□□ -1.3
GTF2H1-209ENST00000528427 KDM3BQ7LBC6 1761 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 C6orf222P0C671 652 aaPredicted RBP6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 STAT5AP42229 794 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 NTRK3Q16288 839 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 TRIM61Q5EBN2 209 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 SYNPOQ8N3V7 929 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 TTLL6Q8N841 843 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 TMOD3Q9NYL9 352 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 ZNF652Q9Y2D9 606 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 LAS1LQ9Y4W2 734 aaKnown RBP6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 FANCIQ9NVI1 1328 aa6.95□□□□□ -1.3
GTF2H1-209ENST00000528427 KDM6AO15550 1401 aaPredicted RBP6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 MYO1BO43795 1136 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 GABREP78334 506 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 ADAM9Q13443 819 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 SQSTM1Q13501 440 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 ALDH1L2Q3SY69 923 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 FAM209AQ5JX71 171 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 FAM26FQ5R3K3 315 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 ZC3H18Q86VM9 953 aaKnown RBP6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 TMEM169Q96HH4 297 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 MRPL4Q9BYD3 311 aaKnown RBP6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 ITGB4P16144 1822 aa6.94□□□□□ -1.3
GTF2H1-209ENST00000528427 DOT1LQ8TEK3 1739 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 KAT6BQ8WYB5 2073 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 H7BY64 318 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 IPO8O15397 1037 aaKnown RBP6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 KCNQ2O43526 872 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 TADA3O75528 432 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 DCTN1Q14203 1278 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 TWISTNBQ3B726 338 aaPredicted RBP6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 EMC4Q5J8M3 183 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 ZNF790Q6PG37 636 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 USP53Q70EK8 1073 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 PTPRN2Q92932 1015 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 PCDHA2Q9Y5H9 948 aa6.93□□□□□ -1.3
GTF2H1-209ENST00000528427 PAPPAQ13219 1627 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 AQP7O14520 342 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 ENPP3O14638 875 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 EFCAB14O75071 495 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 NAT1P18440 290 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 MAGEA10P43363 369 aaPredicted RBP6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 GPR85P60893 370 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 LSAMPQ13449 338 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 TBC1D10BQ4KMP7 808 aaPredicted RBP6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 CCDC30Q5VVM6 783 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 KRT27Q7Z3Y8 459 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 JAZF1Q86VZ6 243 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 TXNDC5Q8NBS9 432 aaKnown RBP6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 ARRDC4Q8NCT1 418 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 THUMPD2Q9BTF0 503 aaKnown RBP6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 PHF20Q9BVI0 1012 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 STK31Q9BXU1 1019 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 ZNF831Q5JPB2 1677 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 NHSQ6T4R5 1651 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 KIF16BQ96L93 1317 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
GTF2H1-209ENST00000528427 TOGARAM1Q9Y4F4 1720 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 TCRBV5S2A0A599 114 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 DDX3XO00571 662 aaKnown RBP eCLIP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 HGSO14964 777 aaPredicted RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 PLATP00750 562 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 SNRPA1P09661 255 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 EIF4A1P60842 406 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 ZNF827Q17R98 1081 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 ZXDCQ2QGD7 858 aaPredicted RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 MCTP2Q6DN12 878 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 IFNL3Q8IZI9 196 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 GSTCDQ8NEC7 633 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 SSBP3Q9BWW4 388 aaPredicted RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 CHMP4BQ9H444 224 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 NCOA5Q9HCD5 579 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 NGRNQ9NPE2 291 aaKnown RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 WASF3Q9UPY6 502 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 INVSQ9Y283 1065 aa6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 COA3Q9Y2R0 106 aaPredicted RBP6.91□□□□□ -1.3
GTF2H1-209ENST00000528427 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms