RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PTK7Q13308 1070 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 PDIA5Q14554 519 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 ECM1Q16610 540 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 KRT79Q5XKE5 535 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 PLPPR4Q7Z2D5 763 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 ERMP1Q7Z2K6 904 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 BMP8AQ7Z5Y6 402 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 CABP7Q86V35 215 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 CATSPER3Q86XQ3 398 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 ATP8B4Q8TF62 1192 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 DNAJB3Q8WWF6 145 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 EDAQ92838 391 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 PBXIP1Q96AQ6 731 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 AK8Q96MA6 479 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 PLIN2Q99541 437 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 C17orf80Q9BSJ5 609 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 SLITRK3O94933 977 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 GJB5O95377 273 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 CHRNA1P02708 482 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 SELPP16109 830 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 RPA1P27694 616 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 MGAT3Q09327 533 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 DRP2Q13474 957 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 COL19A1Q14993 1142 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 TCEAL5Q5H9L2 206 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 SHC4Q6S5L8 630 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 RNF135Q8IUD6 432 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 SUGP1Q8IWZ8 645 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 RASSF8Q8NHQ8 419 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 PIGOQ8TEQ8 1089 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 FAM167AQ96KS9 214 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 RAD9AQ99638 391 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 COL4A6Q14031 1691 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 VPS13AQ96RL7 3174 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 KDM3AQ9Y4C1 1321 aa12.88□□□□□ -0.35
CCDC90B-210ENST00000528149 TPRP12270 2363 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 PLCG1P19174 1290 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 UBA7P41226 1012 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 SLC26A2P50443 739 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 CLCN3P51790 818 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 RBL2Q08999 1139 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 MTERF2Q49AM1 385 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.357e-9■■■■■ 34.2
CCDC90B-210ENST00000528149 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 KCNK18Q7Z418 384 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 ATG2AQ2TAZ0 1938 aa12.87□□□□□ -0.35
CCDC90B-210ENST00000528149 COL1A2P08123 1366 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 A0A087X0B3 334 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 HBP1O60381 514 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 LYPLA2O95372 231 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 C22orf31O95567 290 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 VTNP04004 478 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 GHRP10912 638 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 KLRC1P26715 233 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 TXLNAP40222 546 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 NPEPPSP55786 919 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 CLUL1Q15846 466 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 XKR3Q5GH77 459 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 HYIQ5T013 277 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 MTHFD1LQ6UB35 978 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 ANO5Q75V66 913 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 ASCL5Q7RTU5 278 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 LINC01599Q8WXQ3 324 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 ATOH1Q92858 354 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms