RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 KLHL23Q8NBE8 558 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 SPPL3Q8TCT6 385 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 PRPF31Q8WWY3 499 aaKnown RBP24.07■■□□□ 1.44
HOXA3-204ENST00000521401 TMX3Q96JJ7 454 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 CASD1Q96PB1 797 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 CWH43Q9H720 699 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 XPNPEP1Q9NQW7 623 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 CHST12Q9NRB3 414 aa24.07■■□□□ 1.44
HOXA3-204ENST00000521401 TYW1Q9NV66 732 aaKnown RBP24.07■■□□□ 1.44
HOXA3-204ENST00000521401 SPATA31C1P0DKV0 1188 aa24.06■■□□□ 1.44
HOXA3-204ENST00000521401 ORC2Q13416 577 aaPredicted RBP24.06■■□□□ 1.44
HOXA3-204ENST00000521401 COL19A1Q14993 1142 aa24.06■■□□□ 1.44
HOXA3-204ENST00000521401 PSPC1Q8WXF1 523 aaKnown RBP24.06■■□□□ 1.44
HOXA3-204ENST00000521401 TBC1D32Q96NH3 1257 aa24.06■■□□□ 1.44
HOXA3-204ENST00000521401 INO80BQ9C086 356 aaPredicted RBP24.06■■□□□ 1.44
HOXA3-204ENST00000521401 TMEM117Q9H0C3 514 aa24.06■■□□□ 1.44
HOXA3-204ENST00000521401 ANKEF1Q9NU02 776 aa24.06■■□□□ 1.44
HOXA3-204ENST00000521401 NLRC5Q86WI3 1866 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 A0A087WWV3 80 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 GAS2O43903 313 aaKnown RBP24.05■■□□□ 1.44
HOXA3-204ENST00000521401 SFPQP23246 707 aaKnown RBP eCLIP24.05■■□□□ 1.441e-6■■■■□ 20.5
HOXA3-204ENST00000521401 U2AF2P26368 475 aaKnown RBP eCLIP24.05■■□□□ 1.44
HOXA3-204ENST00000521401 LAMTOR4Q0VGL1 99 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 CLLU1OSQ5K130 101 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 TTC38Q5R3I4 469 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 LRRC55Q6ZSA7 311 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 C4orf32Q8N8J7 132 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 IL27Q8NEV9 243 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 TRAIPQ9BWF2 469 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 UPF2Q9HAU5 1272 aaKnown RBP24.05■■□□□ 1.44
HOXA3-204ENST00000521401 DACT1Q9NYF0 836 aa24.05■■□□□ 1.44
HOXA3-204ENST00000521401 CUL9Q8IWT3 2517 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 OR52Z1P0C646 297 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 TRAPPC10P48553 1259 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 RARRES1P49788 294 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 NBR1Q14596 966 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 FERMT3Q86UX7 667 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 NECAB3Q96P71 396 aaPredicted RBP24.04■■□□□ 1.44
HOXA3-204ENST00000521401 UHRF1Q96T88 793 aaPredicted RBP24.04■■□□□ 1.44
HOXA3-204ENST00000521401 MTRQ99707 1265 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 MINDY3Q9H8M7 445 aa24.04■■□□□ 1.44
HOXA3-204ENST00000521401 HOXA2O43364 376 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 MED24O75448 989 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 EOMESO95936 686 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 SRGAP2CP0DJJ0 459 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 IRS1P35568 1242 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 TECP42680 631 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 TOB1P50616 345 aaPredicted RBP24.03■■□□□ 1.44
HOXA3-204ENST00000521401 SRGAP1Q7Z6B7 1085 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 CATSPER3Q86XQ3 398 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 PIGOQ8TEQ8 1089 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 POF1BQ8WVV4 589 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 TCP11Q8WWU5 503 aa24.03■■□□□ 1.44
HOXA3-204ENST00000521401 PABPC5Q96DU9 382 aaKnown RBP24.03■■□□□ 1.44
HOXA3-204ENST00000521401 PIN4Q9Y237 131 aaKnown RBP24.03■■□□□ 1.44
HOXA3-204ENST00000521401 ASAP2O43150 1006 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 CSPG5O95196 566 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 XRCC6P12956 609 aaKnown RBP eCLIP24.02■■□□□ 1.44
HOXA3-204ENST00000521401 KCNA5P22460 613 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 PHKA2P46019 1235 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 HYAL1Q12794 435 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 LEXMQ3ZCV2 418 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 SPOUT1Q5T280 376 aaKnown RBP24.02■■□□□ 1.44
HOXA3-204ENST00000521401 CATSPER4Q7RTX7 472 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 COLGALT1Q8NBJ5 622 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 RNF169Q8NCN4 708 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.02■■□□□ 1.44
HOXA3-204ENST00000521401 TUFT1Q9NNX1 390 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 AGPAT5Q9NUQ2 364 aa24.02■■□□□ 1.44
HOXA3-204ENST00000521401 TNFRSF10AO00220 468 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 DGAT1O75907 488 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 ARL2P36404 184 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 GNL2Q13823 731 aaKnown RBP24.01■■□□□ 1.43
HOXA3-204ENST00000521401 CTC1Q2NKJ3 1217 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 RNF149Q8NC42 400 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 POLR3CQ9BUI4 534 aaPredicted RBP24.01■■□□□ 1.43
HOXA3-204ENST00000521401 AAASQ9NRG9 546 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 PCDHB12Q9Y5F1 795 aa24.01■■□□□ 1.43
HOXA3-204ENST00000521401 TTC28Q96AY4 2481 aa24■■□□□ 1.43
HOXA3-204ENST00000521401 HOXA11P31270 313 aaPredicted RBP24■■□□□ 1.43
HOXA3-204ENST00000521401 TWF2Q6IBS0 349 aaKnown RBP24■■□□□ 1.43
HOXA3-204ENST00000521401 LRRC43Q8N309 656 aa24■■□□□ 1.43
HOXA3-204ENST00000521401 ASAP3Q8TDY4 903 aa24■■□□□ 1.43
HOXA3-204ENST00000521401 FAM105AQ9NUU6 356 aa24■■□□□ 1.43
HOXA3-204ENST00000521401 NOL7Q9UMY1 257 aaKnown RBP24■■□□□ 1.43
HOXA3-204ENST00000521401 FNDC1Q4ZHG4 1894 aaPredicted RBP24■■□□□ 1.43
HOXA3-204ENST00000521401 ZNF623O75123 536 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 FGF18O76093 207 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 LAG3P18627 525 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 GTF2F1P35269 517 aaKnown RBP eCLIP23.99■■□□□ 1.436e-10■■□□□ 13.4
HOXA3-204ENST00000521401 LTBRP36941 435 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 MCM2P49736 904 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 PTENP60484 403 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 ADGRD2Q7Z7M1 963 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 IFNLR1Q8IU57 520 aaPredicted RBP23.99■■□□□ 1.43
HOXA3-204ENST00000521401 ABI1Q8IZP0 508 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 HELQQ8TDG4 1101 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 LPPQ93052 612 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 PCDHB6Q9Y5E3 794 aa23.99■■□□□ 1.43
HOXA3-204ENST00000521401 KIAA1671Q9BY89 1806 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms