RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KRT31Q15323 416 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CIAPIN1Q6FI81 312 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CAMSAP1Q5T5Y3 1602 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 DDIT3P35638 169 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 RCAN1P53805 252 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 HINFPQ9BQA5 517 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 MINPP1Q9UNW1 487 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 ZNF335Q9H4Z2 1342 aaPredicted RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 PATL1Q86TB9 770 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 ZBTB18Q99592 522 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 NDEL1Q9GZM8 345 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 JAK3P52333 1124 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 NNTQ13423 1086 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 DNAJC24Q6P3W2 148 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 SERPINI1Q99574 410 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 PCDHA6Q9UN73 950 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 PCDHA8Q9Y5H6 950 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 EIF3DO15371 548 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 AP1G2O75843 785 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MSL3Q8N5Y2 521 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 LY9Q9HBG7 655 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 E9PCH4 1651 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 ZBTB5O15062 677 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MCF2P10911 925 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 HSPA6P17066 643 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 ANGPTL8Q6UXH0 198 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 UNC13DQ70J99 1090 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 INTS9Q9NV88 658 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MFAP3LO75121 409 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 IREB2P48200 963 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MXI1P50539 228 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 BPIFA3Q9BQP9 254 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 ATP8B3O60423 1300 aa12.92□□□□□ -0.34
ERGIC1-208ENST00000520399 GNAT1P11488 350 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ART3Q13508 389 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 KCTD16Q68DU8 428 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ABCB6Q9NP58 842 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 MRPL28Q13084 256 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 GRM4Q14833 912 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 SARM1Q6SZW1 724 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 TRIML2Q8N7C3 387 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 RAD54LQ92698 747 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 DACH2Q96NX9 599 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 SOX5P35711 763 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 FEM1BQ9UK73 627 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 CPSF3Q9UKF6 684 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 GOLGA8SH3BPF8 625 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 DHX9Q08211 1270 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 GANCQ8TET4 914 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 SNX19Q92543 992 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 COQ7Q99807 217 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 TMEM47Q9BQJ4 181 aa12.91□□□□□ -0.34
ERGIC1-208ENST00000520399 MYO3BQ8WXR4 1341 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 TADA3O75528 432 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 PRELPP51888 382 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 SLFN12LQ6IEE8 588 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 MPP4Q96JB8 637 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 SPATA17Q96L03 361 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 UPF3AQ9H1J1 476 aaKnown RBP12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 AXIN2Q9Y2T1 843 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 CPP00450 1065 aa12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 CARSP49589 748 aaKnown RBP12.9□□□□□ -0.34
ERGIC1-208ENST00000520399 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms