RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LAG3P18627 525 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 SLC16A2P36021 539 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 MAGEA9P43362 315 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 SARSP49591 514 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 PRKCQQ04759 706 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 MTX1Q13505 466 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CELF3Q5SZQ8 465 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CHCHD4Q8N4Q1 142 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CHURC1Q8WUH1 139 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 BCL7CQ8WUZ0 217 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 DNAJB3Q8WWF6 145 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 NXPE3Q969Y0 559 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 ZNF707Q96C28 371 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 GMCL1Q96IK5 515 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CASD1Q96PB1 797 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 KLHL5Q96PQ7 755 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 VN1R3Q9BXE9 311 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CHRDQ9H2X0 955 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 JADE2Q9NQC1 790 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 CLUHO75153 1309 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 C2orf16Q68DN1 1984 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 MIA3Q5JRA6 1907 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 SPAARA0A1B0GVQ0 90 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 PRDM1O75626 825 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 RFPL2O75678 378 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 MBD4O95243 580 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 AVPP01185 164 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 CSRP1P21291 193 aaKnown RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 NRLP54845 237 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 IKQ13123 557 aaPredicted RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 TMEM266Q2M3C6 531 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 MARCH8Q5T0T0 291 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 SLC9C2Q5TAH2 1124 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 C15orf39Q6ZRI6 1047 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 TPRG1Q6ZUI0 275 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 KBTBD6Q86V97 674 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 GLG1Q92896 1179 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 SPATA33Q96N06 139 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 EDEM2Q9BV94 578 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 CCDC8Q9H0W5 538 aaPredicted RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 ATP8A2Q9NTI2 1148 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 SPG21Q9NZD8 308 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 ISY1Q9ULR0 285 aaKnown RBP8□□□□□ -1.13
CTNNA1-216ENST00000519489 C2CD3Q4AC94 2353 aa8□□□□□ -1.13
CTNNA1-216ENST00000519489 MYH7BA7E2Y1 1941 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 C9IYK1 514 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 CDX4O14627 284 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 GGPS1O95749 300 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 CA8P35219 290 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 SLC1A4P43007 532 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 CLCN4P51793 760 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 FAM193AP78312 1265 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 ATMQ13315 3056 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 WDR44Q5JSH3 913 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 RCSD1Q6JBY9 416 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 SYTL5Q8TDW5 730 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 EAF2Q96CJ1 260 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 ZNF558Q96NG5 402 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 LRFN2Q9ULH4 789 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 PCDHB7Q9Y5E2 793 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 IRAK3Q9Y616 596 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 URB1O60287 2271 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 LAMA4Q16363 1823 aa7.99□□□□□ -1.13
CTNNA1-216ENST00000519489 RALGAPA1Q6GYQ0 2036 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 WNT7AO00755 349 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 TTLL1O95922 423 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 UBA1P22314 1058 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 RARSP54136 660 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 MRPS6P82932 125 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 FGD1P98174 961 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 TMEM62Q0P6H9 643 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 COLEC12Q5KU26 742 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 RSPO2Q6UXX9 243 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 CYP4X1Q8N118 509 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 VPS52Q8N1B4 723 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 CMASQ8NFW8 434 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 SSH1Q8WYL5 1049 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 MRVI1Q9Y6F6 885 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 PTPRCP08575 1304 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 F5P12259 2224 aa7.98□□□□□ -1.13
CTNNA1-216ENST00000519489 MGAQ8IWI9 3026 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 CREBBPQ92793 2442 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 CCDC195A0A1B0GUA6 201 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 LNP1A1A4G5 178 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 LILRB3O75022 631 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 CNPP09543 421 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 MPLP40238 635 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 CCR10P46092 362 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 FAM189BP81408 668 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 KRT17Q04695 432 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms