RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 KRT18P05783 430 aaKnown RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 SRGAP2CP0DJJ0 459 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 CMA1P23946 247 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 CD52P31358 61 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 ARL2P36404 184 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 LAMTOR4Q0VGL1 99 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 MAPK7Q13164 816 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 FAM26DQ5JW98 314 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 FBXO47Q5MNV8 452 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 IER5Q5VY09 327 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 C1orf186Q6ZWK4 172 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 RPAINQ86UA6 219 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 TMEM199Q8N511 208 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 MCPH1Q8NEM0 835 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 FDXACB1Q9BRP7 624 aaPredicted RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 CELF4Q9BZC1 486 aaKnown RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 ADAMTS10Q9H324 1103 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 AGO3Q9H9G7 860 aaKnown RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 KCNH3Q9ULD8 1083 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 HPSEQ9Y251 543 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 PPME1Q9Y570 386 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 MYH11P35749 1972 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 ADGRA3Q8IWK6 1321 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 LRRIQ4A6NIV6 560 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 CAND2O75155 1236 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 LIG1P18858 919 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 AFMP43652 599 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 DNM2P50570 870 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 NUBP1P53384 320 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 RNF149Q8NC42 400 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 IL23AQ9NPF7 189 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 USP20Q9Y2K6 914 aa10.86□□□□□ -0.67
TOPBP1-209ENST00000513818 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 PRPF40AO75400 957 aaKnown RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 EDN1P05305 212 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 GUCY2CP25092 1073 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 SYKP43405 635 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 CRYBB1P53674 252 aaPredicted RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 PEX3P56589 373 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 PAK2Q13177 524 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 SV2BQ7L1I2 683 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 OTOP2Q7RTS6 562 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 NME8Q8N427 588 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 IQUBQ8NA54 791 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 TMEM87AQ8NBN3 555 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 LINC01599Q8WXQ3 324 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 GDF15Q99988 308 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 IFIH1Q9BYX4 1025 aaKnown RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 UBE2OQ9C0C9 1292 aaKnown RBP10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 IFT122Q9HBG6 1241 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
TOPBP1-209ENST00000513818 FAM237AA0A1B0GTK4 181 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CCDC169A6NNP5 214 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 MGEA5O60502 916 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TBCAO75347 108 aaKnown RBP10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 RPS6KA5O75582 802 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 FAM13AO94988 1023 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CXCL10P02778 98 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 DARSP14868 501 aaKnown RBP10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CUL4BQ13620 913 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 GIT2Q14161 759 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TSHZ1Q6ZSZ6 1077 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TMCO2Q7Z6W1 182 aaPredicted RBP10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 SFR1Q86XK3 245 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CEP57L1Q8IYX8 460 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 DDX12PQ92771 950 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 KIFAP3Q92845 792 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 HPS3Q969F9 1004 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms