RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ATF2P15336 505 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 UCHL3P15374 230 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 TRIM50Q86XT4 487 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 SLC25A27O95847 323 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 ZSCAN20P17040 1043 aaPredicted RBP14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 SNAPC2Q13487 334 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 CASC4Q6P4E1 433 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 TMEM35BQ8NCS4 154 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 HAUS1Q96CS2 278 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 ERGIC2Q96RQ1 377 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 RABEP2Q9H5N1 569 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 HSPBP1Q9NZL4 362 aa14.11□□□□□ -0.15
PCDHA4-202ENST00000512229 ABCC6O95255 1503 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ARP10275 920 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 NAA30Q147X3 362 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ERICH1Q86X53 443 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 CCDC117Q8IWD4 279 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 TMEM143Q96AN5 459 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ANKEF1Q9NU02 776 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 MAP3K20Q9NYL2 800 aaKnown RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 MIF4GDA9UHW6 222 aaKnown RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 CCDC188H7C350 402 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 FTLP02792 175 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 FGRP09769 529 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 VCAM1P19320 739 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 SOX5P35711 763 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 FMO5P49326 533 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 PLTPP55058 493 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 TNFAIP2Q03169 654 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 TTI2Q6NXR4 508 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 RPUSD2Q8IZ73 545 aaKnown RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 UHMK1Q8TAS1 419 aaKnown RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 MKNK1Q9BUB5 465 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 AP1M1Q9BXS5 423 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 TOPORSQ9NS56 1045 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 PFASO15067 1338 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 FGGP02679 453 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 RWDD2BP57060 319 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 PRKCEQ02156 737 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 APBA1Q02410 837 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 LGSNQ5TDP6 509 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 B4GALNT4Q76KP1 1039 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ENOSF1Q7L5Y1 443 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 FAM71BQ8TC56 605 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 MKL1Q969V6 931 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ANAPC7Q9UJX3 599 aa14.1□□□□□ -0.15
PCDHA4-202ENST00000512229 ADAMTSL3P82987 1691 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 NFIBO00712 420 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 AP5Z1O43299 807 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SLC7A5Q01650 507 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 GPRASP2Q96D09 838 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 IFT122Q9HBG6 1241 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SLC9A1P19634 815 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SLC18A3Q16572 532 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 CENPPQ6IPU0 288 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 RDM1Q8NG50 284 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 KIAA1683Q9H0B3 1180 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SCINQ9Y6U3 715 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 GOLGA8KD6RF30 607 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 FOXP2O15409 715 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 VIL1P09327 827 aaKnown RBP14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 ACTN1P12814 892 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 SNX1Q13596 522 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 DUOXA2Q1HG44 320 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 PALM2Q8IXS6 379 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 UNC45AQ9H3U1 944 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 HDAC6Q9UBN7 1215 aa14.09□□□□□ -0.15
PCDHA4-202ENST00000512229 KIAA0391O15091 583 aaKnown RBP14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 GNAT1P11488 350 aa14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 BSPRYQ5W0U4 402 aa14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 OR6B2Q6IFH4 312 aa14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 STK33Q9BYT3 514 aa14.08□□□□□ -0.15
PCDHA4-202ENST00000512229 LRRD1A4D1F6 860 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 A6NJR5 290 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 H7C0C1 242 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 ECEL1O95672 775 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 ATP5OP48047 213 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 ITIH3Q06033 890 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 Q4G0T1 1027 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 CTAGE3PQ8IX95 158 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 P3H4Q92791 437 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 OSBPL9Q96SU4 736 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 ABCB6Q9NP58 842 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 ADARB2Q9NS39 739 aaKnown RBP14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 RSPH10B2B2RC85 870 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 RSPH10BP0C881 870 aa14.08□□□□□ -0.16
PCDHA4-202ENST00000512229 GPC3P51654 580 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms