RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TXLNAP40222 546 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CLK1P49759 484 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ATXN3P54252 364 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 UBXN2AP68543 259 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SLC7A5Q01650 507 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DBN1Q16643 649 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DPY19L1Q2PZI1 675 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 LRRFIP1Q32MZ4 808 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BBS9Q3SYG4 887 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SYDE2Q5VT97 1194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CRTC1Q6UUV9 634 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 GADL1Q6ZQY3 521 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CISD2Q8N5K1 135 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ST7LQ8TDW4 575 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PRCCQ92733 491 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 HPS3Q969F9 1004 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DHX58Q96C10 678 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 HES6Q96HZ4 224 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SLC2A13Q96QE2 648 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CNPPD1Q9BV87 410 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MXD3Q9BW11 206 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 NFKBIL1Q9UBC1 381 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TAF1LQ8IZX4 1826 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 GOLGA6L9A6NEM1 432 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 GOLGA6L10A6NI86 522 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 H0YCG3 227 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SMC2O95347 1197 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PRG2P13727 222 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ALOX15P16050 662 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MUTP22033 750 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MTTPP55157 894 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PPFIA1Q13136 1202 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 LRRC14Q15048 493 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TAZQ16635 292 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 POMZP3Q6PJE2 187 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 KRT26Q7Z3Y9 468 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 LRP10Q7Z4F1 713 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 OXR1Q8N573 874 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 RUFY1Q96T51 708 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 NAP1L3Q99457 506 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ADPGKQ9BRR6 497 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DESI2Q9BSY9 194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 AARSD1Q9BTE6 412 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SARGQ9BW04 601 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SH2D4AQ9H788 454 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ARHGAP28Q9P2N2 729 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CHKBQ9Y259 395 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 FAM83GA6ND36 823 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 A6NLC8 198 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MAFKO60675 156 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 USO1O60763 962 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ATP5BP06576 529 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 HSD3B1P14060 373 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 LIG3P49916 1009 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CASP5P51878 434 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CBX3Q13185 183 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DNAJC3Q13217 504 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 IFI44LQ53G44 452 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DALRD3Q5D0E6 543 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MAP3K21Q5TCX8 1036 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CCDC186Q7Z3E2 898 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FAM114A1Q8IWE2 563 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SLC35C2Q9NQQ7 365 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 BLOC1S4Q9NUP1 217 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TMOD2Q9NZR1 351 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ACAD8Q9UKU7 415 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHB14Q9Y5E9 798 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GOLGA8SH3BPF8 625 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PSAPP07602 524 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GHRP10912 638 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MCM3P25205 808 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 RAD52P43351 418 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 AFF3P51826 1226 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ATXN1P54253 815 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PPP4CP60510 307 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 BFSP1Q12934 665 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 KRT33BQ14525 404 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TSGA10IPQ3SY00 556 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PDXDC2PQ6P474 469 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 BRAPQ7Z569 592 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TSPYL6Q8N831 410 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SAT2Q96F10 170 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CDCA5Q96FF9 252 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DHRS1Q96LJ7 313 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 NIFKQ9BYG3 293 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 NSRP1Q9H0G5 558 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TUBB1Q9H4B7 451 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 C17orf75Q9HAS0 396 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FANCFQ9NPI8 374 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CNTN3Q9P232 1028 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHGB3Q9Y5G1 929 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GTPBP1O00178 669 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PRPF4O43172 522 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 KDM1AO60341 852 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DDX58O95786 925 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DNTTP04053 509 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GARTP22102 1010 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 INPP5BP32019 993 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms