RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 H2AFYO75367 372 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 GJB3O75712 270 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 SNRNP70P08621 437 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 IFNAR2P48551 515 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 TFCP2Q12800 502 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 SART3Q15020 963 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 MORN1Q5T089 497 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 OLFML1Q6UWY5 402 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 RGS9BPQ6ZS82 235 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 INTS8Q75QN2 995 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 LURAP1LQ8IV03 231 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 CTCFLQ8NI51 663 aaPredicted RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 GDAP1Q8TB36 358 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 CABS1Q96KC9 395 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 HGH1Q9BTY7 390 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 NUP62CLQ9H1M0 184 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 CRLF2Q9HC73 371 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 MTUS1Q9ULD2 1270 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 KIF3AQ9Y496 699 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 A0A0G2JPF8 293 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 A0A1W2PPL8 197 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 RHPN2P1A8MT19 583 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 HNRNPCL3B7ZW38 293 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 K7EPI3 171 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ZPR1O75312 459 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ZNF254O75437 659 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ATP5BP06576 529 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 HNRNPCL4P0DMR1 293 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 HOXA11P31270 313 aaPredicted RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 TIE1P35590 1138 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ARID5BQ14865 1188 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 ATP2B3Q16720 1220 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 SUPT20HL1Q3ZLR7 823 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 RNF220Q5VTB9 566 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 TPGS2Q68CL5 300 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 KIAA1211LQ6NV74 962 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 CMIPQ8IY22 773 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 EXOC4Q96A65 974 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 AARSD1Q9BTE6 412 aaKnown RBP8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 TRIM5Q9C035 493 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 L1RE1Q9UN81 338 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 TMED5Q9Y3A6 229 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 PCDHB14Q9Y5E9 798 aa8.22□□□□□ -1.09
PDGFRA-206ENST00000508170 hCG_1807616A0A1W2PRN6 198 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 FFAR2O15552 330 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 SMPD2O60906 423 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 KCNH1O95259 989 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 PAMP19021 973 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 ITGA8P53708 1063 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 RELQ04864 619 aaPredicted RBP8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 DCAF17Q5H9S7 520 aaPredicted RBP8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 MEX3CQ5U5Q3 659 aaKnown RBP8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 ARHGAP11AQ6P4F7 1023 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 BLOC1S3Q6QNY0 202 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 POTEAQ6S8J7 498 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 CCDC65Q8IXS2 484 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 SYTL1Q8IYJ3 562 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 KIAA0319LQ8IZA0 1049 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 PDCL2Q8N4E4 241 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 TCP11L2Q8N4U5 519 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 TTLL11Q8NHH1 800 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 CREB3L4Q8TEY5 395 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 NOC3LQ8WTT2 800 aaKnown RBP8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 UTP14AQ9BVJ6 771 aaKnown RBP8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 PREBQ9HCU5 417 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 LRFN1Q9P244 771 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 RIMKLBQ9ULI2 386 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 GRID1Q9ULK0 1009 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 SIK3Q9Y2K2 1263 aa8.21□□□□□ -1.09
PDGFRA-206ENST00000508170 AGRPO00253 132 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 DDX3XO00571 662 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 ERAL1O75616 437 aaKnown RBP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 OPN1MWP04001 364 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 GPC3P51654 580 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 CASP6P55212 293 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 SARNPP82979 210 aaKnown RBP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 RBP5P82980 135 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 IKBKEQ14164 716 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 LRRC32Q14392 662 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 TSTQ16762 297 aaKnown RBP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 ALDH16A1Q8IZ83 802 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 Q8NFD4 153 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 CEP76Q8TAP6 659 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 SGCDQ92629 289 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 NSUN4Q96CB9 384 aaKnown RBP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 WNK4Q96J92 1243 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 CNTD2Q9H8S5 307 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 ETNK1Q9HBU6 452 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 COQ3Q9NZJ6 369 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms