RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 POLGP54098 1239 aaPredicted RBP16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 COASYQ13057 564 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 ME3Q16798 604 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 ZNF598Q86UK7 904 aaKnown RBP16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 RHPN2Q8IUC4 686 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 PSPC1Q8WXF1 523 aaKnown RBP16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 CASD1Q96PB1 797 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 IGFLR1Q9H665 355 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 CWH43Q9H720 699 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 STK39Q9UEW8 545 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 A0A087WZ62 844 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 EML1O00423 815 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 ZNF623O75123 536 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 EYA4O95677 639 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 DNAJB1P25685 340 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 YWHABP31946 246 aaKnown RBP16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 ZP2Q05996 745 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 TWF2Q6IBS0 349 aaKnown RBP16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 KCNT2Q6UVM3 1135 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 CATSPER4Q7RTX7 472 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 HAS1Q92839 578 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 LXNQ9BS40 222 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 SPG21Q9NZD8 308 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 COL4A3BPQ9Y5P4 624 aa16.13■□□□□ 0.17
HMGCS1-203ENST00000507004 KIAA1671Q9BY89 1806 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 RBAK-RBAKDNI3L0D1 243 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 FSCN2O14926 492 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 LYPLA2O95372 231 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 FDPSP14324 419 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 IRS1P35568 1242 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 PHKA2P46019 1235 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 NRIP1P48552 1158 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 ALDH7A1P49419 539 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 NCBP1Q09161 790 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 ORC2Q13416 577 aaPredicted RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 DRP2Q13474 957 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 MXD4Q14582 209 aaPredicted RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 CALCRLQ16602 461 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 NCAPH2Q6IBW4 605 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 GLB1LQ6UWU2 654 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 RNF169Q8NCN4 708 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 CNNM3Q8NE01 707 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 MSLNLQ96KJ4 702 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 NLRP4Q96MN2 994 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 PIN4Q9Y237 131 aaKnown RBP16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 HCN4Q9Y3Q4 1203 aa16.12■□□□□ 0.17
HMGCS1-203ENST00000507004 DCXO43602 365 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 TBX10O75333 385 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 POU5F1BQ06416 359 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 GIT2Q14161 759 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 DUSP6Q16828 381 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 TMEM184AQ6ZMB5 413 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 DIS3L2Q8IYB7 885 aaKnown RBP16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 NECAB1Q8N987 351 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 SMRP1Q8NCR6 262 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 FAM105AQ9NUU6 356 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 RNF19AQ9NV58 838 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 LIMCH1Q9UPQ0 1083 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 MUC3AQ02505 3323 aa16.11■□□□□ 0.17
HMGCS1-203ENST00000507004 NEMFO60524 1076 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 DGAT1O75907 488 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 HOXB8P17481 243 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 AXLP30530 894 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 NPEPPSP55786 919 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 DLX2Q07687 328 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 SPIRE1Q08AE8 756 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 NR5A1Q13285 461 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 TFDP1Q14186 410 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 XKR9Q5GH70 373 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 PLA2G4FQ68DD2 849 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 ADGRD2Q7Z7M1 963 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 CCDC51Q96ER9 411 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 TMEM169Q96HH4 297 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 ZNF668Q96K58 619 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 MTRQ99707 1265 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 TCF25Q9BQ70 676 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 LRFN3Q9BTN0 628 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 CD320Q9NPF0 282 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
HMGCS1-203ENST00000507004 ENTPD7Q9NQZ7 604 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms