RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 STX1AQ16623 288 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 SNAP47Q5SQN1 464 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 FAM109BQ6ICB4 259 aaPredicted RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 GALNT17Q6IS24 598 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 NOSTRINQ8IVI9 506 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 MEIOBQ8N635 442 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 LINC00301Q8NCQ3 95 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 PHC3Q8NDX5 983 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 ANKS1AQ92625 1134 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 CHAMP1Q96JM3 812 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 TOX2Q96NM4 488 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 PYM1Q9BRP8 204 aaKnown RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 SRRTQ9BXP5 876 aaKnown RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 PANK2Q9BZ23 570 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 MTIF3Q9H2K0 278 aaKnown RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 TCP11L1Q9NUJ3 509 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 UBP1Q9NZI7 540 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 CEP290O15078 2479 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 FRMPD2Q68DX3 1309 aaPredicted RBP11.53□□□□□ -0.56
EPHB4-208ENST00000492403 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
EPHB4-208ENST00000492403 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.56
EPHB4-208ENST00000492403 LAMA4Q16363 1823 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 DLL1O00548 723 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 DYNC1LI2O43237 492 aaPredicted RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 CUTAO60888 179 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 ADAMTS4O75173 837 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 MMP1P03956 469 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 ICAM1P05362 532 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 SLC16A2P36021 539 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 LIG3P49916 1009 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 GJA9P57773 515 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 POU4F2Q12837 409 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 SEC23AQ15436 765 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 NTRK3Q16288 839 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 FAM173BQ6P4H8 233 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 RBM43Q6ZSC3 357 aaKnown RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 EEPD1Q7L9B9 569 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 TLK2Q86UE8 772 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 ZSCAN30Q86W11 494 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 ENAHQ8N8S7 591 aaPredicted RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 A1CFQ9NQ94 594 aaKnown RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.57
EPHB4-208ENST00000492403 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
EPHB4-208ENST00000492403 ARVCFO00192 962 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 KIAA0355O15063 1070 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 TIMP1P01033 207 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 PF4P02776 101 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 LIG1P18858 919 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 CST5P28325 142 aaPredicted RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 CDC27P30260 824 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 KRT2P35908 639 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 PEAR1Q5VY43 1037 aaPredicted RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 FAM133AQ8N9E0 248 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 KLHDC9Q8NEP7 349 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
EPHB4-208ENST00000492403 PHKBQ93100 1093 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 PDLIM2Q96JY6 352 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 TMEM47Q9BQJ4 181 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 SEZ6LQ9BYH1 1024 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 LIN7BQ9HAP6 207 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 VTA1Q9NP79 307 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 SH3GLB2Q9NR46 395 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 USP25Q9UHP3 1055 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 TLR6Q9Y2C9 796 aa11.51□□□□□ -0.57
EPHB4-208ENST00000492403 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.5□□□□□ -0.57
EPHB4-208ENST00000492403 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.5□□□□□ -0.57
EPHB4-208ENST00000492403 BECN2A8MW95 431 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 GREM1O60565 184 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 GARTP22102 1010 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 TRAPPC10P48553 1259 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 CPT1AP50416 773 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 BEX3Q00994 111 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 FSCN1Q16658 493 aaKnown RBP11.5□□□□□ -0.57
EPHB4-208ENST00000492403 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
EPHB4-208ENST00000492403 C9orf50Q5SZB4 431 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms