RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HOXA2O43364 376 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 FGFR1P11362 822 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 ECHDC2Q86YB7 292 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 P2RX5Q93086 422 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 NSUN3Q9H649 340 aaKnown RBP22.04■■□□□ 1.12
SMC4-222ENST00000490207 DACT1Q9NYF0 836 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 XIRP2A4UGR9 3374 aa22.04■■□□□ 1.12
SMC4-222ENST00000490207 GRM6O15303 877 aa22.03■■□□□ 1.12
SMC4-222ENST00000490207 U2AF2P26368 475 aaKnown RBP eCLIP22.03■■□□□ 1.123e-7■□□□□ 10.8
SMC4-222ENST00000490207 SPOUT1Q5T280 376 aaKnown RBP22.03■■□□□ 1.12
SMC4-222ENST00000490207 CATSPER4Q7RTX7 472 aa22.03■■□□□ 1.12
SMC4-222ENST00000490207 PRPF31Q8WWY3 499 aaKnown RBP22.03■■□□□ 1.12
SMC4-222ENST00000490207 CHST12Q9NRB3 414 aa22.03■■□□□ 1.12
SMC4-222ENST00000490207 ANKEF1Q9NU02 776 aa22.03■■□□□ 1.12
SMC4-222ENST00000490207 PIN4Q9Y237 131 aaKnown RBP22.03■■□□□ 1.12
SMC4-222ENST00000490207 TCF20Q9UGU0 1960 aaKnown RBP22.02■■□□□ 1.12
SMC4-222ENST00000490207 TECP42680 631 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 LAMTOR4Q0VGL1 99 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 NBR1Q14596 966 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 NAALADL2Q58DX5 795 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 RNF169Q8NCN4 708 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 TMEM117Q9H0C3 514 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 IFT122Q9HBG6 1241 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 TUFT1Q9NNX1 390 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 XPNPEP1Q9NQW7 623 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 RNF19AQ9NV58 838 aa22.02■■□□□ 1.12
SMC4-222ENST00000490207 CUL9Q8IWT3 2517 aa22.02■■□□□ 1.11
SMC4-222ENST00000490207 A0A0U1RQF3 1178 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 DGAT1O75907 488 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 CSPG5O95196 566 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 SRGAP2CP0DJJ0 459 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 GJB2P29033 226 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 RARRES1P49788 294 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 KCNQ1P51787 676 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 TCEAL5Q5H9L2 206 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 TWF2Q6IBS0 349 aaKnown RBP22.01■■□□□ 1.11
SMC4-222ENST00000490207 FERMT3Q86UX7 667 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 KLHL23Q8NBE8 558 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 ERMNQ8TAM6 284 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 PIGOQ8TEQ8 1089 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 UBE2ZQ9H832 354 aaPredicted RBP22.01■■□□□ 1.11
SMC4-222ENST00000490207 ALG13Q9NP73 1137 aaKnown RBP22.01■■□□□ 1.11
SMC4-222ENST00000490207 AAASQ9NRG9 546 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 HCSTQ9UBK5 93 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 PLAGL2Q9UPG8 496 aa22.01■■□□□ 1.11
SMC4-222ENST00000490207 ASAP2O43150 1006 aa22■■□□□ 1.11
SMC4-222ENST00000490207 MED24O75448 989 aa22■■□□□ 1.11
SMC4-222ENST00000490207 ITGB1P05556 798 aa22■■□□□ 1.11
SMC4-222ENST00000490207 SPATA31C1P0DKV0 1188 aa22■■□□□ 1.11
SMC4-222ENST00000490207 ATF7P17544 494 aaPredicted RBP22■■□□□ 1.11
SMC4-222ENST00000490207 MCTP1Q6DN14 999 aa22■■□□□ 1.11
SMC4-222ENST00000490207 SRGAP1Q7Z6B7 1085 aa22■■□□□ 1.11
SMC4-222ENST00000490207 LRRC43Q8N309 656 aa22■■□□□ 1.11
SMC4-222ENST00000490207 RNF149Q8NC42 400 aa22■■□□□ 1.11
SMC4-222ENST00000490207 ADAMTS19Q8TE59 1207 aa22■■□□□ 1.11
SMC4-222ENST00000490207 CASD1Q96PB1 797 aa22■■□□□ 1.11
SMC4-222ENST00000490207 POLR3CQ9BUI4 534 aaPredicted RBP22■■□□□ 1.11
SMC4-222ENST00000490207 AGPAT5Q9NUQ2 364 aa22■■□□□ 1.11
SMC4-222ENST00000490207 TYW1Q9NV66 732 aaKnown RBP22■■□□□ 1.11
SMC4-222ENST00000490207 PCDHB12Q9Y5F1 795 aa22■■□□□ 1.11
SMC4-222ENST00000490207 BRWD1Q9NSI6 2320 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 USO1O60763 962 aaKnown RBP21.99■■□□□ 1.11
SMC4-222ENST00000490207 EOMESO95936 686 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 PHKA2P46019 1235 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 CLLU1OSQ5K130 101 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 HAUS3Q68CZ6 603 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 ZNF598Q86UK7 904 aaKnown RBP21.99■■□□□ 1.11
SMC4-222ENST00000490207 CATSPER3Q86XQ3 398 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 COLGALT1Q8NBJ5 622 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 CWH43Q9H720 699 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 MINDY3Q9H8M7 445 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 SMC3Q9UQE7 1217 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 PCDHB6Q9Y5E3 794 aa21.99■■□□□ 1.11
SMC4-222ENST00000490207 A0A087WWV3 80 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 H3BQV1 296 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 XRCC6P12956 609 aaKnown RBP eCLIP21.98■■□□□ 1.11
SMC4-222ENST00000490207 LAG3P18627 525 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 TOB1P50616 345 aaPredicted RBP21.98■■□□□ 1.11
SMC4-222ENST00000490207 FXR2P51116 673 aaKnown RBP eCLIP21.98■■□□□ 1.113e-10■□□□□ 11
SMC4-222ENST00000490207 RAB27AP51159 221 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 TFDP1Q14186 410 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 MXD4Q14582 209 aaPredicted RBP21.98■■□□□ 1.11
SMC4-222ENST00000490207 POTEGQ6S5H5 508 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 C4orf32Q8N8J7 132 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 SPPL3Q8TCT6 385 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 HELQQ8TDG4 1101 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 TRAIPQ9BWF2 469 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 FAM105AQ9NUU6 356 aa21.98■■□□□ 1.11
SMC4-222ENST00000490207 SKIP12755 728 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 BMP1P13497 986 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 RPA1P27694 616 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 CSPP1Q1MSJ5 1256 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 THNSL1Q8IYQ7 743 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 ASAP3Q8TDY4 903 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 POF1BQ8WVV4 589 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 NACC1Q96RE7 527 aa21.97■■□□□ 1.11
SMC4-222ENST00000490207 UHRF1Q96T88 793 aaPredicted RBP21.97■■□□□ 1.11
SMC4-222ENST00000490207 POLR3FQ9H1D9 316 aaPredicted RBP21.97■■□□□ 1.11
SMC4-222ENST00000490207 DBR1Q9UK59 544 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms