RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
SNX17-207ENST00000489402 A0A0U1RQF3 1178 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 HIDE1A8MVS5 230 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
SNX17-207ENST00000489402 IFNAR1P17181 557 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 FGFR4P22455 802 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
SNX17-207ENST00000489402 HSPA4P34932 840 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 DNM2P50570 870 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 KCNC3Q14003 757 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 NTRK3Q16288 839 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 MTERF2Q49AM1 385 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 CLLU1OSQ5K130 101 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 SLC39A11Q8N1S5 342 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 TBCKQ8TEA7 893 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 SLC5A5Q92911 643 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 KCNB2Q92953 911 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 TMEM169Q96HH4 297 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 SH2D3AQ9BRG2 576 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 GCOM2Q9BZD3 368 aaPredicted RBP10.54□□□□□ -0.72
SNX17-207ENST00000489402 INO80BQ9C086 356 aaPredicted RBP10.54□□□□□ -0.72
SNX17-207ENST00000489402 UNC45AQ9H3U1 944 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
SNX17-207ENST00000489402 CHST12Q9NRB3 414 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
SNX17-207ENST00000489402 C2orf71A6NGG8 1288 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 CPLX1O14810 134 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 REC8O95072 547 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 SKIP12755 728 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 SP100P23497 879 aaPredicted RBP10.53□□□□□ -0.72
SNX17-207ENST00000489402 BCAR1P56945 870 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
SNX17-207ENST00000489402 ITIH3Q06033 890 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
SNX17-207ENST00000489402 DRP2Q13474 957 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 XKR3Q5GH77 459 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
SNX17-207ENST00000489402 SYCE2Q6PIF2 218 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
SNX17-207ENST00000489402 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 NECTIN4Q96NY8 510 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 AGXT2Q9BYV1 514 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 HCFC2Q9Y5Z7 792 aa10.53□□□□□ -0.72
SNX17-207ENST00000489402 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
SNX17-207ENST00000489402 PSMD10O75832 226 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 PDIA3P30101 505 aaKnown RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 MTHFRP42898 656 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 PHKA2P46019 1235 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 RAB27AP51159 221 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 GIT2Q14161 759 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 Q4G0T1 1027 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 IER5LQ5T953 404 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 KANK3Q6NY19 840 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 GLB1LQ6UWU2 654 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 RHPN2Q8IUC4 686 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 ASIC4Q96FT7 647 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 RIPOR3Q96MK2 946 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 NIFKQ9BYG3 293 aaKnown RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 IRF2BPLQ9H1B7 796 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 ADAM7Q9H2U9 754 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 PCDHA4Q9UN74 947 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 PIN4Q9Y237 131 aaKnown RBP10.52□□□□□ -0.73
SNX17-207ENST00000489402 VPS13AQ96RL7 3174 aa10.52□□□□□ -0.73
SNX17-207ENST00000489402 A0A087WZ62 844 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 CLASP2O75122 1294 aaKnown RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 STBD1O95210 358 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 DEXIO95424 95 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 TDP2O95551 362 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 CXCL14O95715 111 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 POLGP54098 1239 aaPredicted RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 EVCP57679 992 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 CPLX2Q6PUV4 134 aaKnown RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 MOXD1Q6UVY6 613 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 CATSPER4Q7RTX7 472 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
SNX17-207ENST00000489402 VPS52Q8N1B4 723 aa10.51□□□□□ -0.73
SNX17-207ENST00000489402 NLRP4Q96MN2 994 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms