RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
LDLRAP1-207ENST00000488127 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
LDLRAP1-207ENST00000488127 GAS8O95995 478 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 NR3C1P04150 777 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 CTSHP09668 335 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 GNAT1P11488 350 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 ACTN3Q08043 901 aaPredicted RBP12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 TMEM62Q0P6H9 643 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 TAF11Q15544 211 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 VPS41P49754 854 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 CFAP61Q8NHU2 1237 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 SNX25Q9H3E2 840 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 KCNF1Q9H3M0 494 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 KCNH7Q9NS40 1196 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 PHKA2P46019 1235 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 EVX2Q03828 476 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 MESDQ14696 234 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 PPP1R21Q6ZMI0 780 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 TAB3Q8N5C8 712 aaPredicted RBP12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 GSDMBQ8TAX9 411 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 NPEPPSP55786 919 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLC7A5Q01650 507 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 TCP11X2Q5H9J9 407 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 RILPQ96NA2 401 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 VPS37BQ9H9H4 285 aa12.56□□□□□ -0.4
LDLRAP1-207ENST00000488127 NFIBO00712 420 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 BSPRYQ5W0U4 402 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLC30A10Q6XR72 485 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 NEK9Q8TD19 979 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 DPF2Q92785 391 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 EHD4Q9H223 541 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 ZBED2Q9BTP6 218 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 NUF2Q9BZD4 464 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 PVALEFA0A1B0GWK0 134 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 ARHGAP42A6NI28 874 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 I3L4J1 428 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 ALS2CLQ60I27 953 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 TBC1D1Q86TI0 1168 aaPredicted RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 RGPD8O14715 1765 aaPredicted RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLC25A27O95847 323 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 RHBDL3P58872 404 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 THAP9Q9H5L6 903 aa12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
LDLRAP1-207ENST00000488127 STAM2O75886 525 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 ICAM1P05362 532 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 GTF2A2P52657 109 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 METTL16Q86W50 562 aaKnown RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 ORC2Q13416 577 aaPredicted RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 PDIA5Q14554 519 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLIT3O75094 1523 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 ZBBXA8MT70 800 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 NDUFA10O95299 355 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 EYA4O95677 639 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 BPIFB4P59827 614 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 TOGARAM2Q6ZUX3 1019 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 OR6B3Q8NGW1 331 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 IDI2Q9BXS1 227 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
LDLRAP1-207ENST00000488127 MYO1FO00160 1098 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 SLC37A4O43826 429 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 RNF8O76064 485 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms