RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 MMP19Q99542 508 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 LRRC2Q9BYS8 371 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 ATXN3LQ9H3M9 355 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 LY9Q9HBG7 655 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 CWC22Q9HCG8 908 aaKnown RBP7.51□□□□□ -1.21
SEC22C-215ENST00000487701 DOCK5Q9H7D0 1870 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 SYNGAP1Q96PV0 1343 aa7.51□□□□□ -1.21
SEC22C-215ENST00000487701 DNAH12Q6ZR08 3092 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 DNAJC25-GNG10A0A024R161 153 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 STRNO43815 780 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 PRPF40AO75400 957 aaKnown RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 REC8O95072 547 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ICAM1P05362 532 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 PGK2P07205 417 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 PARP1P09874 1014 aaKnown RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 FCER1AP12319 257 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 EN2P19622 333 aaPredicted RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 MCM5P33992 734 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ADMP35318 185 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 COPB2P35606 906 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 RGS19P49795 217 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 CACNB2Q08289 660 aaPredicted RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 TROAPQ12815 778 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 GRM4Q14833 912 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ASPRV1Q53RT3 343 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 GPATCH4Q5T3I0 446 aaKnown RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ZAR1Q86SH2 424 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ABRAQ8N0Z2 381 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 SHISA4Q96DD7 197 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 FGD4Q96M96 766 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 KRTAP4-12Q9BQ66 201 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 MYL10Q9BUA6 226 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 UBA5Q9GZZ9 404 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
SEC22C-215ENST00000487701 HOMER2Q9NSB8 354 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 RNF146Q9NTX7 359 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 MAD2L2Q9UI95 211 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 SNX14Q9Y5W7 946 aa7.5□□□□□ -1.21
SEC22C-215ENST00000487701 ERICH2A1L162 156 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 FAM170BA6NMN3 283 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 KIAA1324LA8MWY0 1029 aaPredicted RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ENC1O14682 589 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 RNGTTO60942 597 aaKnown RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 PAGE1O75459 146 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ALAS1P13196 640 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CPA1P15085 419 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 EIF4BP23588 611 aaKnown RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CCND3P30281 292 aaPredicted RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 GNA15P30679 374 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CYP2C19P33261 490 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 UBXN2AP68543 259 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 SART3Q15020 963 aaKnown RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CDC37Q16543 378 aaPredicted RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 DPP9Q86TI2 863 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ADGRF4Q8IZF3 695 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 TRPV1Q8NER1 839 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CHST13Q8NET6 341 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 MAML3Q96JK9 1138 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 TMEM87BQ96K49 555 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 FRMD6Q96NE9 622 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 NEK1Q96PY6 1258 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 GSX1Q9H4S2 264 aaPredicted RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ACAD9Q9H845 621 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 A1CFQ9NQ94 594 aaKnown RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CCPG1Q9ULG6 757 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
SEC22C-215ENST00000487701 ASTN1O14525 1302 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 RPTORQ8N122 1335 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 WDR19Q8NEZ3 1342 aa7.49□□□□□ -1.21
SEC22C-215ENST00000487701 NFIBO00712 420 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 DYNC1LI2O43237 492 aaPredicted RBP7.48□□□□□ -1.21
SEC22C-215ENST00000487701 CYTH3O43739 400 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 PPP1R11O60927 126 aaPredicted RBP7.48□□□□□ -1.21
SEC22C-215ENST00000487701 DDAH1O94760 285 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 GJB1P08034 283 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 RXRAP19793 462 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 LIFRP42702 1097 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 GJA8P48165 433 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 FGD1P98174 961 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 KRT32Q14532 448 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 TTLL4Q14679 1199 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 KCTD2Q14681 263 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 CPSF6Q16630 551 aaKnown RBP eCLIP7.48□□□□□ -1.21
SEC22C-215ENST00000487701 QRICH1Q2TAL8 776 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 TKFCQ3LXA3 575 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 CATIPQ7Z7H3 387 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 SGMS1Q86VZ5 419 aa7.48□□□□□ -1.21
SEC22C-215ENST00000487701 RAB11FIP4Q86YS3 637 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms