RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 WRNIP1Q96S55 665 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 MRPL4Q9BYD3 311 aaKnown RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 ZSWIM4Q9H7M6 989 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 NCOA5Q9HCD5 579 aaKnown RBP3.26□□□□□ -1.89
USH2A-204ENST00000481786 SMURF1Q9HCE7 757 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 CATSPERZQ9NTU4 200 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 FTSJ1Q9UET6 329 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 SFMBT1Q9UHJ3 866 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 ADAM29Q9UKF5 820 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 PTPN22Q9Y2R2 807 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 ATRNO75882 1429 aa3.26□□□□□ -1.89
USH2A-204ENST00000481786 SLIT1O75093 1534 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 NCOA2Q15596 1464 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 RALGAPBQ86X10 1494 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 TCRBV16S1A1N1A0A5B0 115 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 ZNF839A8K0R7 811 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 GSTA4O15217 222 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 CYP7B1O75881 506 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 ENO2P09104 434 aaPredicted RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 PTPN1P18031 435 aaKnown RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 ATF3P18847 181 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 KRT15P19012 456 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 ACO1P21399 889 aaKnown RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 COMTP21964 271 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 DNM2P50570 870 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 ST5P78524 1137 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 PFKPQ01813 784 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 CRY1Q16526 586 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 SKIDA1Q1XH10 827 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 CCDC144BQ3MJ40 725 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 FAM47CQ5HY64 1035 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 FIGNQ5HY92 759 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 BTBD8Q5XKL5 378 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 BHLHA9Q7RTU4 235 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 BRAPQ7Z569 592 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 FGD2Q7Z6J4 655 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 MRGPRGQ86SM5 289 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 MRFAP1L1Q96HT8 127 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 CELF4Q9BZC1 486 aaKnown RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 PIF1Q9H611 641 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 KANSL2Q9H9L4 492 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 BARX1Q9HBU1 254 aaPredicted RBP3.25□□□□□ -1.89
USH2A-204ENST00000481786 TRIM39Q9HCM9 518 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 ATP23Q9Y6H3 246 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 UTRNP46939 3433 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 CLIP1P30622 1438 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 SAMD9LQ8IVG5 1584 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 PNPLA6Q8IY17 1366 aa3.25□□□□□ -1.89
USH2A-204ENST00000481786 PRXQ9BXM0 1461 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 KCNK3O14649 394 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 PLD2O14939 933 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 CLASP2O75122 1294 aaKnown RBP3.24□□□□□ -1.89
USH2A-204ENST00000481786 KLHL18O94889 574 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 IL18BPO95998 194 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 KNG1P01042 644 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 C4BPAP04003 597 aaKnown RBP3.24□□□□□ -1.89
USH2A-204ENST00000481786 CHGBP05060 677 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 ADH4P08319 380 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 BMP5P22003 454 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 GLRBP48167 497 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 DBPQ10586 325 aaPredicted RBP3.24□□□□□ -1.89
USH2A-204ENST00000481786 SEC23AQ15436 765 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 CCDC142Q17RM4 750 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 ABHD17CQ6PCB6 329 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 BRINP3Q76B58 766 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 OVCH1Q7RTY7 1134 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 SH3TC2Q8TF17 1288 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 CLUHP3Q96NS8 147 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 SEC61A2Q9H9S3 476 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 SPON1Q9HCB6 807 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 SLC39A2Q9NP94 309 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 KCND1Q9NSA2 647 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 RIC8BQ9NVN3 520 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 ARHGAP20Q9P2F6 1191 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 ZFP69BQ9UJL9 534 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 COQ6Q9Y2Z9 468 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 TROQ12816 1431 aaPredicted RBP3.24□□□□□ -1.89
USH2A-204ENST00000481786 PTCH1Q13635 1447 aa3.24□□□□□ -1.89
USH2A-204ENST00000481786 ARHGAP35Q9NRY4 1499 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 MROH1Q8NDA8 1641 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 GJA4P35212 333 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 SMAD2Q15796 467 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 FNDC3BQ53EP0 1204 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 FSTL4Q6MZW2 842 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 RALYLQ86SE5 291 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 NOSTRINQ8IVI9 506 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 CISD2Q8N5K1 135 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 STPG3Q8N7X2 389 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 NTN5Q8WTR8 489 aaPredicted RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 CLIP3Q96DZ5 547 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 TTPALQ9BTX7 342 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 BTBD7Q9P203 1132 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 KIAA1107Q9UPP5 1409 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 SLC4A7Q9Y6M7 1214 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 KDM5AP29375 1690 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 DHX29Q7Z478 1369 aaKnown RBP3.23□□□□□ -1.89
USH2A-204ENST00000481786 TMEM2Q9UHN6 1383 aa3.23□□□□□ -1.89
USH2A-204ENST00000481786 SPHKAPQ2M3C7 1700 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 INO80Q9ULG1 1556 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms