RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 NEDD9Q14511 834 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 LETM2Q2VYF4 491 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 DUSP28Q4G0W2 176 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 PRR16Q569H4 304 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 EARS2Q5JPH6 523 aaKnown RBP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 TTC38Q5R3I4 469 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 ATL3Q6DD88 541 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 TAPT1Q6NXT6 567 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 METTL7BQ6UX53 244 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SEPT14Q6ZU15 432 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 PLA2G4DQ86XP0 818 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SH3TC2Q8TF17 1288 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 ZNF333Q96JL9 665 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 MBOAT7Q96N66 472 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 RIT2Q99578 217 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SENP7Q9BQF6 1050 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 MXRA8Q9BRK3 442 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SDF4Q9BRK5 362 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 ZNF577Q9BSK1 485 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 KATNBL1Q9H079 304 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 RNF208Q9H0X6 261 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 AGO4Q9HCK5 861 aaKnown RBP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 PAK6Q9NQU5 681 aaPredicted RBP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 KCNH7Q9NS40 1196 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 TBC1D22BQ9NU19 505 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 ZDHHC3Q9NYG2 299 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 RTEL1Q9NZ71 1219 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 DDX20Q9UHI6 824 aaKnown RBP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 DDX25Q9UHL0 483 aaKnown RBP4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SLC6A14Q9UN76 642 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 CEP131Q9UPN4 1083 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 SMCHD1A6NHR9 2005 aa4.99□□□□□ -1.61
CNTN3-202ENST00000477856 NFASCO94856 1347 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 KIAA1217Q5T5P2 1943 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 F8W735 103 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 IPO5O00410 1097 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 NOP56O00567 594 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 MSH4O15457 936 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 SLC37A4O43826 429 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 ZEB2O60315 1214 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 MARCH6O60337 910 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 TDP2O95551 362 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 BRD1O95696 1058 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 GGPS1O95749 300 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 OR52Z1P0C646 297 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CCL5P13501 91 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 KCNA2P16389 499 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CST5P28325 142 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CCND3P30281 292 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 MCM7P33993 719 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 PRPHP41219 470 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 ADCYAP1R1P41586 468 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 GJA9P57773 515 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 NKX3-2P78367 333 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 RESTQ13127 1097 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CALCRLQ16602 461 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 TMEM266Q2M3C6 531 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 PRAMEF19Q5SWL8 479 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CELF3Q5SZQ8 465 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 LRCH2Q5VUJ6 765 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CCDC62Q6P9F0 684 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 RNF180Q86T96 592 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 TLK2Q86UE8 772 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 FERMT3Q86UX7 667 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 SMAP1Q8IYB5 467 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 PCSK9Q8NBP7 692 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 TRPV1Q8NER1 839 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 OR6J1Q8NGC5 347 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 PPTC7Q8NI37 304 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 ETNPPLQ8TBG4 499 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 FOXD4L4Q8WXT5 416 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 SLC5A5Q92911 643 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 LENG9Q96B70 501 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 FAM20AQ96MK3 541 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 ZNF396Q96N95 335 aaPredicted RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 RAB34Q9BZG1 259 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 AP5M1Q9H0R1 490 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 MLXIPQ9HAP2 919 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 NEUROD4Q9HD90 331 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 XPNPEP3Q9NQH7 507 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 PDGFCQ9NRA1 345 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CHMP5Q9NZZ3 219 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 DDX41Q9UJV9 622 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 CFAP45Q9UL16 551 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 GNEQ9Y223 722 aaKnown RBP4.98□□□□□ -1.61
CNTN3-202ENST00000477856 HTTP42858 3142 aa4.98□□□□□ -1.61
CNTN3-202ENST00000477856 SYNRGQ9UMZ2 1314 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 FRMPD3Q5JV73 1810 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 MYH7BA7E2Y1 1941 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.97□□□□□ -1.61
CNTN3-202ENST00000477856 KBTBD13C9JR72 458 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 BIN1O00499 593 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 KPNA6O60684 536 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 GAS7O60861 476 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 PSMD10O75832 226 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 CABYRO75952 493 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 ARIH2O95376 493 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 YEATS4O95619 227 aa4.97□□□□□ -1.61
CNTN3-202ENST00000477856 GJB1P08034 283 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms