RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 DDIT3P35638 169 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 RFC5P40937 340 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 FAM189BP81408 668 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 FAM173BQ6P4H8 233 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 SLC24A5Q71RS6 500 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 OTUD6AQ7L8S5 288 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 MTRQ99707 1265 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
PTPN7-209ENST00000477554 GCOM2Q9BZD3 368 aaPredicted RBP19.67■□□□□ 0.74
PTPN7-209ENST00000477554 ANKEF1Q9NU02 776 aa19.67■□□□□ 0.74
PTPN7-209ENST00000477554 MYO7AQ13402 2215 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 STX6O43752 255 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 SYT1P21579 422 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 CTNNB1P35222 781 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 DNM2P50570 870 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 NUCB2P80303 420 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 GRIN1Q05586 938 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
PTPN7-209ENST00000477554 LRRC55Q6ZSA7 311 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 KCNK18Q7Z418 384 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 IGSF22Q8N9C0 903 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 RNF149Q8NC42 400 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 NEK9Q8TD19 979 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 TUFT1Q9NNX1 390 aa19.66■□□□□ 0.74
PTPN7-209ENST00000477554 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 VPS37CA5D8V6 355 aaPredicted RBP19.65■□□□□ 0.74
PTPN7-209ENST00000477554 TBKBP1A7MCY6 615 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 GRM6O15303 877 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 POU3F3P20264 500 aaPredicted RBP19.65■□□□□ 0.74
PTPN7-209ENST00000477554 GLRA2P23416 452 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 RPA1P27694 616 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 ARL2P36404 184 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 CCT6AP40227 531 aaKnown RBP19.65■□□□□ 0.74
PTPN7-209ENST00000477554 CAPSQ13938 189 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 CLLU1OSQ5K130 101 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 ZNF410Q86VK4 478 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 ECHDC2Q86YB7 292 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 RNF169Q8NCN4 708 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 PSPC1Q8WXF1 523 aaKnown RBP19.65■□□□□ 0.74
PTPN7-209ENST00000477554 BSNDQ8WZ55 320 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 CLP1Q92989 425 aaKnown RBP19.65■□□□□ 0.74
PTPN7-209ENST00000477554 LPPQ93052 612 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 CHMP5Q9NZZ3 219 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 LRWD1Q9UFC0 647 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 LRFN2Q9ULH4 789 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 PCDHB7Q9Y5E2 793 aa19.65■□□□□ 0.74
PTPN7-209ENST00000477554 DNAJB1P25685 340 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 BMPR1AP36894 532 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 ATP2C1P98194 919 aaPredicted RBP19.64■□□□□ 0.73
PTPN7-209ENST00000477554 TFF2Q03403 129 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 GPM6BQ13491 265 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 ZNF598Q86UK7 904 aaKnown RBP19.64■□□□□ 0.73
PTPN7-209ENST00000477554 LRRC15Q8TF66 581 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 CASD1Q96PB1 797 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 POLR3FQ9H1D9 316 aaPredicted RBP19.64■□□□□ 0.73
PTPN7-209ENST00000477554 ATP6V0A4Q9HBG4 840 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 C1orf112Q9NSG2 853 aa19.64■□□□□ 0.73
PTPN7-209ENST00000477554 PIN4Q9Y237 131 aaKnown RBP19.64■□□□□ 0.73
PTPN7-209ENST00000477554 MUC3AQ02505 3323 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 E9PMD0 336 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 H3BNC9 293 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 HOXA11P31270 313 aaPredicted RBP19.63■□□□□ 0.73
PTPN7-209ENST00000477554 PBX3P40426 434 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 CAMK1Q14012 370 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 RILPL1Q5EBL4 403 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 CATSPER4Q7RTX7 472 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 CMTR2Q8IYT2 770 aaKnown RBP19.63■□□□□ 0.73
PTPN7-209ENST00000477554 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 PLIN2Q99541 437 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 ALG13Q9NP73 1137 aaKnown RBP19.63■□□□□ 0.73
PTPN7-209ENST00000477554 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
PTPN7-209ENST00000477554 KIAA1024Q9UPX6 916 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 USP20Q9Y2K6 914 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 PCDHGC5Q9Y5F6 944 aa19.63■□□□□ 0.73
PTPN7-209ENST00000477554 TTLL13PA6NNM8 815 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 DGAT1O75907 488 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 EDN1P05305 212 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 STAG3L1P0CL83 205 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 AFF1P51825 1210 aaKnown RBP19.62■□□□□ 0.73
PTPN7-209ENST00000477554 UBXN11Q5T124 520 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 CPB2Q96IY4 423 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 PNMA5Q96PV4 448 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 JPH2Q9BR39 696 aaPredicted RBP19.62■□□□□ 0.73
PTPN7-209ENST00000477554 CWH43Q9H720 699 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 TYW1Q9NV66 732 aaKnown RBP19.62■□□□□ 0.73
PTPN7-209ENST00000477554 TMEM161AQ9NX61 479 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 DBR1Q9UK59 544 aaKnown RBP19.62■□□□□ 0.73
PTPN7-209ENST00000477554 PPME1Q9Y570 386 aa19.62■□□□□ 0.73
PTPN7-209ENST00000477554 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 C5orf67F2Z3F1 127 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 B4GALT5O43286 388 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 GTPBP6O43824 516 aaPredicted RBP19.61■□□□□ 0.73
PTPN7-209ENST00000477554 ZSCAN20P17040 1043 aaPredicted RBP19.61■□□□□ 0.73
PTPN7-209ENST00000477554 RESTQ13127 1097 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 AMHR2Q16671 573 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 PADI6Q6TGC4 694 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
PTPN7-209ENST00000477554 HELQQ8TDG4 1101 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 BHMT2Q9H2M3 363 aa19.61■□□□□ 0.73
PTPN7-209ENST00000477554 CLIC4Q9Y696 253 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms