RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 KLHL5Q96PQ7 755 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 PIGSQ96S52 555 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-209ENST00000473783 MAN1C1Q9NR34 630 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 SEMA4GQ9NTN9 838 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 NUMBLQ9Y6R0 609 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 MYH9P35579 1960 aaKnown RBP12.04□□□□□ -0.48
SSBP1-209ENST00000473783 MAST4O15021 2626 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 COL1A2P08123 1366 aa12.04□□□□□ -0.48
SSBP1-209ENST00000473783 GREB1Q4ZG55 1949 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 DOCK6Q96HP0 2047 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CCDC195A0A1B0GUA6 201 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 FAM170BA6NMN3 283 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CNPP09543 421 aaKnown RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 ITGB5P18084 799 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 STAT5BP51692 787 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 MLF2Q15773 248 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CSRP2Q16527 193 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 MCMDC2Q4G0Z9 681 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CELF5Q8N6W0 485 aaKnown RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 BBXQ8WY36 941 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CUL5Q93034 780 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 CLDN23Q96B33 292 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 DCTPP1Q9H773 170 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 SLC9A2Q9UBY0 812 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
SSBP1-209ENST00000473783 SPAG17Q6Q759 2223 aa12.02□□□□□ -0.48
SSBP1-209ENST00000473783 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 A0A0D9SFI3 127 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 INPPL1O15357 1258 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 NCAM2O15394 837 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 HBP1O60381 514 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 PAPLNO95428 1278 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 NRLP54845 237 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 GPC5P78333 572 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 SLC35G1Q2M3R5 365 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 ZBTB41Q5SVQ8 909 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 KDF1Q8NAX2 398 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 BCL7CQ8WUZ0 217 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 SMG7Q92540 1137 aaKnown RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 UBAC1Q9BSL1 405 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 LTB4R2Q9NPC1 389 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.49
SSBP1-209ENST00000473783 MTF2Q9Y483 593 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 ZFP37Q9Y6Q3 630 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-209ENST00000473783 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 B4E1Z4 1266 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 ZNF213O14771 459 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 GPR32O75388 356 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 LIMK1P53667 647 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 ACTR2P61160 394 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 SLC44A4Q53GD3 710 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 TSSK4Q6SA08 328 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 ZNF589Q86UQ0 364 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-209ENST00000473783 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 EVI5LQ96CN4 794 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 NELL2Q99435 816 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 VN1R3Q9BXE9 311 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 MRPL17Q9NRX2 175 aaKnown RBP12.01□□□□□ -0.49
SSBP1-209ENST00000473783 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 UBIAD1Q9Y5Z9 338 aa12.01□□□□□ -0.49
SSBP1-209ENST00000473783 HELZ2Q9BYK8 2649 aaKnown RBP12.01□□□□□ -0.49
SSBP1-209ENST00000473783 DSPP15924 2871 aaKnown RBP12.01□□□□□ -0.49
SSBP1-209ENST00000473783 TMEM8BA6NDV4 472 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 C1QTNF9BB2RNN3 333 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 MEIS2O14770 477 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 CYTH3O43739 400 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 GDF9O60383 454 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 LILRB3O75022 631 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 ADH1AP07327 375 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 GALTP07902 379 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 C1QTNF9P0C862 333 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 MX1P20591 662 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 PFKPQ01813 784 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 PPP2R5DQ14738 602 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 LPAL2Q16609 132 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 ZNF484Q5JVG2 852 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 LRSAM1Q6UWE0 723 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
SSBP1-209ENST00000473783 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 ZNF707Q96C28 371 aaPredicted RBP12□□□□□ -0.49
SSBP1-209ENST00000473783 NRDE2Q9H7Z3 1164 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 JADE2Q9NQC1 790 aa12□□□□□ -0.49
SSBP1-209ENST00000473783 DACT1Q9NYF0 836 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms