RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 SAMD11Q96NU1 681 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 ELAC1Q9H777 363 aaKnown RBP10.19□□□□□ -0.78
SYN3-211ENST00000472027 ATP6V0A4Q9HBG4 840 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 CHST12Q9NRB3 414 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 RNF216Q9NWF9 866 aaPredicted RBP10.19□□□□□ -0.78
SYN3-211ENST00000472027 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 MTCH2Q9Y6C9 303 aa10.19□□□□□ -0.78
SYN3-211ENST00000472027 PP2D1A8MPX8 630 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 GTPBP6O43824 516 aaPredicted RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 LINC00271P0C7V0 271 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 SFPQP23246 707 aaKnown RBP eCLIP10.18□□□□□ -0.78
SYN3-211ENST00000472027 GATMP50440 423 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 PAN2Q504Q3 1202 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 ARL6IP4Q66PJ3 421 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 CATSPER4Q7RTX7 472 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 HSCBQ8IWL3 235 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 CMTR2Q8IYT2 770 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 SLC17A8Q8NDX2 589 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 FBXO22Q8NEZ5 403 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 ASAP3Q8TDY4 903 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 SNX29Q8TEQ0 813 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 GDPD5Q8WTR4 605 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 MINDY3Q9H8M7 445 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
SYN3-211ENST00000472027 TMEM161AQ9NX61 479 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 DACT1Q9NYF0 836 aa10.18□□□□□ -0.78
SYN3-211ENST00000472027 A0A0U1RQF3 1178 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 ARHGEF35A5YM69 484 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 VWA3AA6NCI4 1184 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 E9PMD0 336 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 H3BNC9 293 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 RB1P06400 928 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 FGFR1P11362 822 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 CYP11B2P19099 503 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 GLRA2P23416 452 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 BMPR1AP36894 532 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 PTENP60484 403 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 POU5F1BQ06416 359 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 RESTQ13127 1097 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 GPM6BQ13491 265 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 TFDP1Q14186 410 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 SF3A1Q15459 793 aaKnown RBP10.17□□□□□ -0.78
SYN3-211ENST00000472027 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 ECHDC2Q86YB7 292 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 MICALL1Q8N3F8 863 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 MMTAG2Q9BU76 263 aaKnown RBP10.17□□□□□ -0.78
SYN3-211ENST00000472027 POLR3FQ9H1D9 316 aaPredicted RBP10.17□□□□□ -0.78
SYN3-211ENST00000472027 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 GPRC5CQ9NQ84 441 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 LMCD1Q9NZU5 365 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 DNM3Q9UQ16 869 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 MTMR6Q9Y217 621 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 PIN4Q9Y237 131 aaKnown RBP10.17□□□□□ -0.78
SYN3-211ENST00000472027 RWDD3Q9Y3V2 267 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 MRPL42Q9Y6G3 142 aaKnown RBP10.17□□□□□ -0.78
SYN3-211ENST00000472027 LOXHD1Q8IVV2 1947 aa10.17□□□□□ -0.78
SYN3-211ENST00000472027 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 C5orf67F2Z3F1 127 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 STX6O43752 255 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 EYA4O95677 639 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 EOMESO95936 686 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 BMP15O95972 392 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 HOXA11P31270 313 aaPredicted RBP10.16□□□□□ -0.78
SYN3-211ENST00000472027 CTNNB1P35222 781 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 PHKA2P46019 1235 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 CAPSQ13938 189 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 TWF2Q6IBS0 349 aaKnown RBP10.16□□□□□ -0.78
SYN3-211ENST00000472027 FAM173BQ6P4H8 233 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
SYN3-211ENST00000472027 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
SYN3-211ENST00000472027 RNF169Q8NCN4 708 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 NFKBIZQ9BYH8 718 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 POLD4Q9HCU8 107 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 AGPAT5Q9NUQ2 364 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 FAM105AQ9NUU6 356 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 RNF19AQ9NV58 838 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 CLIC4Q9Y696 253 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 TTC3P53804 2025 aa10.16□□□□□ -0.78
SYN3-211ENST00000472027 COL4A6Q14031 1691 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 CDH23Q9H251 3354 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 INO80B-WBP1J3KQ70 363 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 HOXA2O43364 376 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 ERLIN2O94905 339 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 SKIP12755 728 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 ATF7P17544 494 aaPredicted RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 GRIN1Q05586 938 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 PCBP1Q15365 356 aaKnown RBP eCLIP10.15□□□□□ -0.78
SYN3-211ENST00000472027 ZRSR1Q15695 479 aaKnown RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 PTPROQ16827 1216 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 HYIQ5T013 277 aa10.15□□□□□ -0.78
SYN3-211ENST00000472027 SPOUT1Q5T280 376 aaKnown RBP10.15□□□□□ -0.78
SYN3-211ENST00000472027 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
SYN3-211ENST00000472027 AK8Q96MA6 479 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms