RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 TUFT1Q9NNX1 390 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
LDHB-205ENST00000470280 MYO9BQ13459 2157 aa11.72□□□□□ -0.53
LDHB-205ENST00000470280 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
LDHB-205ENST00000470280 STAG3L1P0CL83 205 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 FGFR1P11362 822 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 RPA1P27694 616 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 CDC25AP30304 524 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 BTG3Q14201 252 aaPredicted RBP11.71□□□□□ -0.53
LDHB-205ENST00000470280 ODR4Q5SWX8 454 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
LDHB-205ENST00000470280 MTRQ99707 1265 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 PCDHB7Q9Y5E2 793 aa11.71□□□□□ -0.53
LDHB-205ENST00000470280 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
LDHB-205ENST00000470280 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 DGAT1O75907 488 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 CTNNB1P35222 781 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 ARL2P36404 184 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 BMPR1AP36894 532 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 CCT6AP40227 531 aaKnown RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 ATP2C1P98194 919 aaPredicted RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 CDC42EP1Q00587 391 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 ECHDC2Q86YB7 292 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
LDHB-205ENST00000470280 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 CMTR2Q8IYT2 770 aaKnown RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 CLP1Q92989 425 aaKnown RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 MMTAG2Q9BU76 263 aaKnown RBP11.7□□□□□ -0.54
LDHB-205ENST00000470280 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 GPRC5CQ9NQ84 441 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 REV3LO60673 3130 aa11.7□□□□□ -0.54
LDHB-205ENST00000470280 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 C5orf67F2Z3F1 127 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 H3BNC9 293 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHB-205ENST00000470280 ZSCAN20P17040 1043 aaPredicted RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHB-205ENST00000470280 GLRA2P23416 452 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 PRPHP41219 470 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 GPM6BQ13491 265 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 CAPSQ13938 189 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 PDIA5Q14554 519 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 MAEAQ7L5Y9 396 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 CATSPER4Q7RTX7 472 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 KCNK18Q7Z418 384 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 RNF149Q8NC42 400 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 SAMD11Q96NU1 681 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 ELAC1Q9H777 363 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 POLD4Q9HCU8 107 aa11.69□□□□□ -0.54
LDHB-205ENST00000470280 DBR1Q9UK59 544 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 PRRC2BQ5JSZ5 2229 aaKnown RBP11.69□□□□□ -0.54
LDHB-205ENST00000470280 A0A0U1RQF3 1178 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 MEIS3P2A8K0S8 358 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 E9PMD0 336 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 LAD1O00515 517 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 GRM6O15303 877 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 ASAP2O43150 1006 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 MAP3K13O43283 966 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 SYT1P21579 422 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
LDHB-205ENST00000470280 PTENP60484 403 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 RESTQ13127 1097 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 LONRF3Q496Y0 759 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 DTHD1Q6ZMT9 781 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 LRRC55Q6ZSA7 311 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 FAM43BQ6ZT52 329 aaPredicted RBP11.68□□□□□ -0.54
LDHB-205ENST00000470280 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 SNX21Q969T3 373 aa11.68□□□□□ -0.54
LDHB-205ENST00000470280 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
LDHB-205ENST00000470280 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
LDHB-205ENST00000470280 CASD1Q96PB1 797 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms