RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 PRPHP41219 470 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 ERVK-21P61565 698 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 CAPSQ13938 189 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 ZRSR1Q15695 479 aaKnown RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 SLC24A5Q71RS6 500 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 ZNF410Q86VK4 478 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 PLIN2Q99541 437 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 MMTAG2Q9BU76 263 aaKnown RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 PRRC2BQ5JSZ5 2229 aaKnown RBP13.14□□□□□ -0.31
EDEM3-204ENST00000466392 TRANK1O15050 2925 aa13.14□□□□□ -0.31
EDEM3-204ENST00000466392 REV3LO60673 3130 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 LAD1O00515 517 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
EDEM3-204ENST00000466392 PDCP20941 246 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
EDEM3-204ENST00000466392 GLRA2P23416 452 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
EDEM3-204ENST00000466392 PDIA5Q14554 519 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 BRAPQ7Z569 592 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 NACC1Q96RE7 527 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
EDEM3-204ENST00000466392 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
EDEM3-204ENST00000466392 PCDHB7Q9Y5E2 793 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
EDEM3-204ENST00000466392 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 GAS2O43903 313 aaKnown RBP13.12□□□□□ -0.31
EDEM3-204ENST00000466392 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
EDEM3-204ENST00000466392 CTNNB1P35222 781 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 ARL2P36404 184 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 EXOC8Q8IYI6 725 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 LPPQ93052 612 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 RAB34Q9BZG1 259 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 MYH11P35749 1972 aa13.12□□□□□ -0.31
EDEM3-204ENST00000466392 TBKBP1A7MCY6 615 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 STX6O43752 255 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 FAM189BP81408 668 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 ECHDC2Q86YB7 292 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 CMTR2Q8IYT2 770 aaKnown RBP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
EDEM3-204ENST00000466392 AGPAT5Q9NUQ2 364 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
EDEM3-204ENST00000466392 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 INO80B-WBP1J3KQ70 363 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 ASAP2O43150 1006 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 B4GALT5O43286 388 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
EDEM3-204ENST00000466392 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
EDEM3-204ENST00000466392 PHKA2P46019 1235 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 PTENP60484 403 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 GPM6BQ13491 265 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 PKP1Q13835 747 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
EDEM3-204ENST00000466392 PTPAQ15257 358 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
EDEM3-204ENST00000466392 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
EDEM3-204ENST00000466392 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
EDEM3-204ENST00000466392 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms