RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CCDC103Q8IW40 242 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 TRMT2AQ8IZ69 625 aaKnown RBP4.61□□□□□ -1.67
SCFD1-204ENST00000463622 TSPYL6Q8N831 410 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 NKX2-4Q9H2Z4 354 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 CYP26B1Q9NR63 512 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 NCANO14594 1321 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 IBTKQ9P2D0 1353 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-204ENST00000463622 KDM3BQ7LBC6 1761 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 TCERG1O14776 1098 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 FOXD2O60548 495 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 NTSR2O95665 410 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 FPR2P25090 351 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 RPS12P25398 132 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 DNAJA1P31689 397 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 FKBP1BP68106 108 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 DPP8Q6V1X1 898 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 SMARCC2Q8TAQ2 1214 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 DDX11Q96FC9 970 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 PEX11GQ96HA9 241 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 SPATA25Q9BR10 227 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 ST7Q9NRC1 585 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.6□□□□□ -1.675e-7■■■□□ 17.9
SCFD1-204ENST00000463622 PRKAG3Q9UGI9 489 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 LAS1LQ9Y4W2 734 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 MAP3K15Q6ZN16 1313 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 UBN2Q6ZU65 1347 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 TRBV23OR9-2A0A075B6M9 112 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 C22orf46C9J442 243 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 CHL1O00533 1208 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 SUSD5O60279 629 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 RBM25P49756 843 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 SLURP1P55000 103 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 EXOSC9Q06265 439 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 TTLL7Q6ZT98 887 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 STK32CQ86UX6 486 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 ZNF227Q86WZ6 799 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 RASAL3Q86YV0 1011 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 CRACR2BQ8N4Y2 399 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 C8orf58Q8NAV2 365 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 NETO2Q8NC67 525 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 NPLOC4Q8TAT6 608 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 DCPSQ96C86 337 aaKnown RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 TSPAN17Q96FV3 270 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 MMP19Q99542 508 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 TMX4Q9H1E5 349 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-204ENST00000463622 FBXL7Q9UJT9 491 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 HDAC9Q9UKV0 1011 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 TNNQ9UQP3 1299 aa4.6□□□□□ -1.67
SCFD1-204ENST00000463622 SCN7AQ01118 1682 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 UBR2Q8IWV8 1755 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ADM5C9JUS6 153 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ELL2O00472 640 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 PSMD14O00487 310 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 HTATSF1O43719 755 aaKnown RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 GJB6O95452 261 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 SNRPB2P08579 225 aaKnown RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 VIL1P09327 827 aaKnown RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 NAT2P11245 290 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 GPTP24298 496 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 BCL6P41182 706 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 KCNJ6P48051 423 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ZNF143P52747 638 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ZNF280AP59817 542 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 SMAD4Q13485 552 aaKnown RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 TAF7Q15545 349 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 TBC1D10BQ4KMP7 808 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-204ENST00000463622 PARP10Q53GL7 1025 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 MCF2L2Q86YR7 1114 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 FAM26EQ8N5C1 309 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 TINF2Q9BSI4 451 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 RNF38Q9H0F5 515 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 R3HDMLQ9H3Y0 253 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ABCC4O15439 1325 aa4.59□□□□□ -1.67
SCFD1-204ENST00000463622 ARFGEF2Q9Y6D5 1785 aa4.59□□□□□ -1.68
SCFD1-204ENST00000463622 CACNA1SQ13698 1873 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 SGSM2O43147 1006 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 FGRP09769 529 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 LCP1P13796 627 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 GRIA2P42262 883 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 KCNC1P48547 511 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 GNL2Q13823 731 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 TNNI3KQ59H18 835 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 DENND5AQ6IQ26 1287 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 CEP68Q76N32 757 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 PPP1R42Q7Z4L9 355 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 B3GNT8Q7Z7M8 397 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 WDR63Q8IWG1 891 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 CELF2-AS1Q8N7Q2 184 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 KREMEN2Q8NCW0 462 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 CDCA5Q96FF9 252 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 UTP14AQ9BVJ6 771 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 PNNQ9H307 717 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 IFT57Q9NWB7 429 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 E9PSI1 815 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 ANXA1P04083 346 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 EIF4A1P60842 406 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms