RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 MYO9BQ13459 2157 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 MEIS3P2A8K0S8 358 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 K7ELQ4 463 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 DKC1O60832 514 aaKnown RBP eCLIP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 LYPLA2O95372 231 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 PBX3P40426 434 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 FXR2P51116 673 aaKnown RBP eCLIP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 TFF2Q03403 129 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 GPM6BQ13491 265 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 CAPSQ13938 189 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 SLC24A5Q71RS6 500 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 CATSPER4Q7RTX7 472 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 RNF149Q8NC42 400 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 NEK9Q8TD19 979 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 SNX29Q8TEQ0 813 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 PSPC1Q8WXF1 523 aaKnown RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 FOXD4L4Q8WXT5 416 aaPredicted RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 IFT122Q9HBG6 1241 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 TUFT1Q9NNX1 390 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 ALG13Q9NP73 1137 aaKnown RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 DDX19AQ9NUU7 478 aaKnown RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 RNF19AQ9NV58 838 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 LRWD1Q9UFC0 647 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 PCDHB7Q9Y5E2 793 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
TMEM254-208ENST00000463209 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
TMEM254-208ENST00000463209 UNC80Q8N2C7 3258 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 MYH15Q9Y2K3 1946 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 E9PMD0 336 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 GRM6O15303 877 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 B4GALT5O43286 388 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 STAG3L1P0CL83 205 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ATF7P17544 494 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 LIG1P18858 919 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 SFPQP23246 707 aaKnown RBP eCLIP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 GLRA2P23416 452 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 DNAJB1P25685 340 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ATP2C1P98194 919 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 CEBPZQ03701 1054 aaKnown RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 GRIN1Q05586 938 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ORC2Q13416 577 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 CLLU1OSQ5K130 101 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 PADI6Q6TGC4 694 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 KCNK18Q7Z418 384 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 CDR2LQ86X02 465 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ECHDC2Q86YB7 292 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ERMNQ8TAM6 284 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 BSNDQ8WZ55 320 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 MMTAG2Q9BU76 263 aaKnown RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 POLR3CQ9BUI4 534 aaPredicted RBP9.59□□□□□ -0.87
TMEM254-208ENST00000463209 KIFC3Q9BVG8 833 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 ANKEF1Q9NU02 776 aa9.59□□□□□ -0.87
TMEM254-208ENST00000463209 PRUNE2Q8WUY3 3088 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 ARHGEF35A5YM69 484 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 INO80B-WBP1J3KQ70 363 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 ZSCAN20P17040 1043 aaPredicted RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 SYT1P21579 422 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 RPA1P27694 616 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 BMPR1AP36894 532 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 MBTD1Q05BQ5 628 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 RESTQ13127 1097 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 ODR4Q5SWX8 454 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 TWF2Q6IBS0 349 aaKnown RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 DTHD1Q6ZMT9 781 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 LRRC55Q6ZSA7 311 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 ZNF410Q86VK4 478 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 CMTR2Q8IYT2 770 aaKnown RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 IGSF22Q8N9C0 903 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 PNMA5Q96PV4 448 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 JPH2Q9BR39 696 aaPredicted RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 EIF2AQ9BY44 585 aaKnown RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 INO80BQ9C086 356 aaPredicted RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 BHMT2Q9H2M3 363 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 AGPAT5Q9NUQ2 364 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 TYW1Q9NV66 732 aaKnown RBP9.58□□□□□ -0.88
TMEM254-208ENST00000463209 TMEM161AQ9NX61 479 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 INPP5FQ9Y2H2 1132 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 CLIC4Q9Y696 253 aa9.58□□□□□ -0.88
TMEM254-208ENST00000463209 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 H3BNC9 293 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 TSPAN1O60635 241 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 DGAT1O75907 488 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 EDN1P05305 212 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 ITGB1P05556 798 aa9.57□□□□□ -0.88
TMEM254-208ENST00000463209 HOXA11P31270 313 aaPredicted RBP9.57□□□□□ -0.88
TMEM254-208ENST00000463209 GTF2F1P35269 517 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms