RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 RARBP10826 455 aa8□□□□□ -1.13
NUP50-212ENST00000461194 VAMP1P23763 118 aa8□□□□□ -1.13
NUP50-212ENST00000461194 LIFRP42702 1097 aa8□□□□□ -1.13
NUP50-212ENST00000461194 RPS6P62753 249 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 BAATQ14032 418 aaPredicted RBP8□□□□□ -1.13
NUP50-212ENST00000461194 MBTPS1Q14703 1052 aa8□□□□□ -1.13
NUP50-212ENST00000461194 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 QRICH1Q2TAL8 776 aa8□□□□□ -1.13
NUP50-212ENST00000461194 PCNX4Q63HM2 1172 aa8□□□□□ -1.13
NUP50-212ENST00000461194 RNF207Q6ZRF8 634 aa8□□□□□ -1.13
NUP50-212ENST00000461194 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 CATIPQ7Z7H3 387 aa8□□□□□ -1.13
NUP50-212ENST00000461194 CCDC144CPQ8IYA2 1237 aa8□□□□□ -1.13
NUP50-212ENST00000461194 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
NUP50-212ENST00000461194 MORC4Q8TE76 937 aa8□□□□□ -1.13
NUP50-212ENST00000461194 MTMR8Q96EF0 704 aa8□□□□□ -1.13
NUP50-212ENST00000461194 MAP3K14Q99558 947 aa8□□□□□ -1.13
NUP50-212ENST00000461194 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
NUP50-212ENST00000461194 KATNBL1Q9H079 304 aa8□□□□□ -1.13
NUP50-212ENST00000461194 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 JMJD4Q9H9V9 463 aa8□□□□□ -1.13
NUP50-212ENST00000461194 LY9Q9HBG7 655 aa8□□□□□ -1.13
NUP50-212ENST00000461194 VAT1LQ9HCJ6 419 aa8□□□□□ -1.13
NUP50-212ENST00000461194 ADD3Q9UEY8 706 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 ZHX1Q9UKY1 873 aaPredicted RBP8□□□□□ -1.13
NUP50-212ENST00000461194 FAM184BQ9ULE4 1060 aa8□□□□□ -1.13
NUP50-212ENST00000461194 NR2E3Q9Y5X4 410 aa8□□□□□ -1.13
NUP50-212ENST00000461194 ASTN1O14525 1302 aa8□□□□□ -1.13
NUP50-212ENST00000461194 ABCB11O95342 1321 aa8□□□□□ -1.13
NUP50-212ENST00000461194 PTPDC1A2A3K4 754 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 H0YGN5 161 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 ZBTB5O15062 677 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 DUSP11O75319 330 aaKnown RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 DDAH1O94760 285 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 CALML3P27482 149 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 NOS3P29474 1203 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 ADGRE1Q14246 886 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 KRT32Q14532 448 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 LRRC41Q15345 812 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 SLC35G1Q2M3R5 365 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 USH1GQ495M9 461 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 EXOSC6Q5RKV6 272 aaKnown RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 GJC2Q5T442 439 aaPredicted RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 RASIP1Q5U651 963 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 SLC30A10Q6XR72 485 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 MCF2L2Q86YR7 1114 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 ZNF654Q8IZM8 581 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 NUP133Q8WUM0 1156 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 NEK1Q96PY6 1258 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 NOC4LQ9BVI4 516 aaKnown RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 AMNQ9BXJ7 453 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 SENP6Q9GZR1 1112 aaPredicted RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 RIOX1Q9H6W3 641 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 XPNPEP3Q9NQH7 507 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 RAD18Q9NS91 495 aa7.99□□□□□ -1.13
NUP50-212ENST00000461194 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
NUP50-212ENST00000461194 CCDC69A6NI79 296 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 KBTBD13C9JR72 458 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 EPB41L2O43491 1005 aaKnown RBP7.98□□□□□ -1.13
NUP50-212ENST00000461194 CYTH3O43739 400 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 ADAMTS4O75173 837 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 REC8O95072 547 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 RECKO95980 971 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 PGK1P00558 417 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 GLB1P16278 677 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 LIG1P18858 919 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 SMARCA1P28370 1054 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 KIF5BP33176 963 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 HSPA4P34932 840 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 ALDH5A1P51649 535 aaPredicted RBP7.98□□□□□ -1.13
NUP50-212ENST00000461194 EXOSC10Q01780 885 aaKnown RBP7.98□□□□□ -1.13
NUP50-212ENST00000461194 TRAF1Q13077 416 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 LRRC14Q15048 493 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 ADCK5Q3MIX3 580 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 NFXL1Q6ZNB6 911 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 RNF180Q86T96 592 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 PDZD3Q86UT5 571 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 SGMS1Q86VZ5 419 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 C12orf50Q8NA57 414 aaPredicted RBP7.98□□□□□ -1.13
NUP50-212ENST00000461194 KLHDC9Q8NEP7 349 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 DNERQ8NFT8 737 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 CTCFLQ8NI51 663 aaPredicted RBP7.98□□□□□ -1.13
NUP50-212ENST00000461194 LZTS2Q9BRK4 669 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 MYL10Q9BUA6 226 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 VTA1Q9NP79 307 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 GGT7Q9UJ14 662 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 SLC12A7Q9Y666 1083 aa7.98□□□□□ -1.13
NUP50-212ENST00000461194 MEGF11A6BM72 1044 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 ADCY6O43306 1168 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 PPP1R11O60927 126 aaPredicted RBP7.97□□□□□ -1.13
NUP50-212ENST00000461194 HMGB1P09429 215 aaKnown RBP7.97□□□□□ -1.13
NUP50-212ENST00000461194 CALM1P0DP23 149 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 CALM2P0DP24 149 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 CALM3P0DP25 149 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 EDNRBP24530 442 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 CST5P28325 142 aaPredicted RBP7.97□□□□□ -1.13
NUP50-212ENST00000461194 ZNF76P36508 570 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 ADCYAP1R1P41586 468 aa7.97□□□□□ -1.13
NUP50-212ENST00000461194 GNAQP50148 359 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms