RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 RPLP2P05387 115 aaKnown RBP14□□□□□ -0.17
HDAC4-207ENST00000461113 CTSHP09668 335 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 DNAJB1P25685 340 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 NRIP1P48552 1158 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 NUCB2P80303 420 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 PDIA5Q14554 519 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 PLCB4Q15147 1175 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
HDAC4-207ENST00000461113 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 ATL3Q6DD88 541 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 TRMT1LQ7Z2T5 733 aaKnown RBP14□□□□□ -0.17
HDAC4-207ENST00000461113 ZBTB33Q86T24 672 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 RBM23Q86U06 439 aaKnown RBP14□□□□□ -0.17
HDAC4-207ENST00000461113 RSPH3Q86UC2 560 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 TMEM105Q8N8V8 129 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
HDAC4-207ENST00000461113 PCYT2Q99447 389 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 LRWD1Q9UFC0 647 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 CFAP45Q9UL16 551 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 PLAGL2Q9UPG8 496 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 TELO2Q9Y4R8 837 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
HDAC4-207ENST00000461113 ADGRA3Q8IWK6 1321 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 WNT7AO00755 349 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 GLP2RO95838 553 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 OATP04181 439 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC4-207ENST00000461113 IGBP1P78318 339 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-207ENST00000461113 PRKCEQ02156 737 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 GRIK4Q16099 956 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 KRT79Q5XKE5 535 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 B3GNT9Q6UX72 402 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 TPH2Q8IWU9 490 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 EIF2AK1Q9BQI3 630 aaKnown RBP13.99□□□□□ -0.17
HDAC4-207ENST00000461113 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
HDAC4-207ENST00000461113 COL1A2P08123 1366 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 EML1O00423 815 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 MAGEB2O15479 319 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 INSRRP14616 1297 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
HDAC4-207ENST00000461113 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-207ENST00000461113 STK38Q15208 465 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 TAF2Q6P1X5 1199 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 DGLUCYQ7Z3D6 616 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 C4orf32Q8N8J7 132 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 RMDN1Q96DB5 314 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 JPH2Q9BR39 696 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-207ENST00000461113 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
HDAC4-207ENST00000461113 TUFT1Q9NNX1 390 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-207ENST00000461113 MICAL3Q7RTP6 2002 aa13.98□□□□□ -0.17
HDAC4-207ENST00000461113 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 POTEMA6NI47 508 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 TREHO43280 583 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 ITGB1P05556 798 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-207ENST00000461113 TMOD1P28289 359 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CCT6AP40227 531 aaKnown RBP13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CYP4A11Q02928 519 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 C4orf19Q8IY42 314 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 RASSF8Q8NHQ8 419 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 SPPL3Q8TCT6 385 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 LMBR1Q8WVP7 490 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 SUSD6Q92537 303 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 APBB2Q92870 758 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 DYDC2Q96IM9 177 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 AK8Q96MA6 479 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CNTNAP3BQ96NU0 1288 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 LXNQ9BS40 222 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CNTNAP3Q9BZ76 1288 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 CACNA1BQ00975 2339 aa13.97□□□□□ -0.17
HDAC4-207ENST00000461113 M0QZ92 97 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 CAND2O75155 1236 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 BRD1O95696 1058 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
HDAC4-207ENST00000461113 MUTP22033 750 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
HDAC4-207ENST00000461113 TXLNAP40222 546 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 UBA7P41226 1012 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 DNM2P50570 870 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 SPIRE1Q08AE8 756 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 CTTNQ14247 550 aaKnown RBP13.96□□□□□ -0.17
HDAC4-207ENST00000461113 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-207ENST00000461113 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms