RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TNMDQ9H2S6 317 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 PANK4Q9NVE7 773 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 USP25Q9UHP3 1055 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 ZMYND8Q9ULU4 1186 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 COL4A3BPQ9Y5P4 624 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 CDY2AQ9Y6F7 541 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 MYH15Q9Y2K3 1946 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 BIN1O00499 593 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 SLC16A4O15374 487 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 TBCAO75347 108 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 COL9A1P20849 921 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 NPTX2P47972 431 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 GPC3P51654 580 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 MRPS6P82932 125 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 DPYDQ12882 1025 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 CAPSQ13938 189 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 KMT5BQ4FZB7 885 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 ZC2HC1CQ53FD0 456 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 HERC4Q5GLZ8 1057 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 ODR4Q5SWX8 454 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 SFR1Q86XK3 245 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 TMEM40Q8WWA1 233 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 TCP11Q8WWU5 503 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 TIGD1Q96MW7 591 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 JPH2Q9BR39 696 aaPredicted RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 NOC4LQ9BVI4 516 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 CELF4Q9BZC1 486 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 IKZF4Q9H2S9 585 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 MINDY3Q9H8M7 445 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 PPME1Q9Y570 386 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 PCDHA5Q9Y5H7 936 aa9.6□□□□□ -0.87
CLTCL1-204ENST00000458188 MROH7Q68CQ1 1323 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 KLRC4O43908 158 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 TRAK2O60296 914 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 RPN1P04843 607 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 IQCF3P0C7M6 154 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 GHRP10912 638 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 PLS3P13797 630 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 RAG1P15918 1043 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 IBSPP21815 317 aaPredicted RBP9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 MGAT3Q09327 533 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 COASYQ13057 564 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 CAVIN1Q6NZI2 390 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 LRRC8DQ7L1W4 858 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 DEFB128Q7Z7B8 93 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 RSPH3Q86UC2 560 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 NME8Q8N427 588 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 DEPTORQ8TB45 409 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 IFT74Q96LB3 600 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 DRC1Q96MC2 740 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 SEZ6LQ9BYH1 1024 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 UBE2OQ9C0C9 1292 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 LRRC27Q9C0I9 530 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 WNT8AQ9H1J5 351 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 NUP62CLQ9H1M0 184 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 CLSTN2Q9H4D0 955 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 MAGEF1Q9HAY2 307 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 PARVGQ9HBI0 331 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 KMT5AQ9NQR1 393 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 KCND2Q9NZV8 630 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 TMEM63CQ9P1W3 806 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 TBX21Q9UL17 535 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 MAPK8IP1Q9UQF2 711 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 TRPV2Q9Y5S1 764 aa9.59□□□□□ -0.87
CLTCL1-204ENST00000458188 ADGRA3Q8IWK6 1321 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 INO80B-WBP1J3KQ70 363 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 K7ENM7 598 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 M0QZ92 97 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 ASAP2O43150 1006 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 NBNO60934 754 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 PRPF6O94906 941 aaKnown RBP9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 MBD3O95983 291 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 MYBP10242 640 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 ACRP10323 421 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 SELPP16109 830 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 CD52P31358 61 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 CASP5P51878 434 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 KCNA1Q09470 495 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 NFX1Q12986 1120 aaKnown RBP9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 STK4Q13043 487 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 BFSP2Q13515 415 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 TFDP1Q14186 410 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 MXD4Q14582 209 aaPredicted RBP9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 GPNMBQ14956 572 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 TCTN1Q2MV58 587 aa9.58□□□□□ -0.88
CLTCL1-204ENST00000458188 UNC13DQ70J99 1090 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms