RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TMEM31Q5JXX7 168 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 RBM23Q86U06 439 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 TRAIPQ9BWF2 469 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 GCOM2Q9BZD3 368 aaPredicted RBP20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 CYP26B1Q9NR63 512 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 TLR9Q9NR96 1032 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 SUCLA2Q9P2R7 463 aaPredicted RBP20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 CD207Q9UJ71 328 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 FAM50BQ9Y247 325 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 LZTS1Q9Y250 596 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 FAM86C2PA6NEL3 165 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 HOXA2O43364 376 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 EOMESO95936 686 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 P4HBP07237 508 aaKnown RBP20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 XBP1P17861 261 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 SSTR3P32745 418 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 PBX3P40426 434 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 RBM10P98175 930 aaKnown RBP20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 CDC42EP1Q00587 391 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 COASYQ13057 564 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 KCNC3Q14003 757 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 KCNT2Q6UVM3 1135 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 ZNF410Q86VK4 478 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 THNSL1Q8IYQ7 743 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 SMRP1Q8NCR6 262 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 SCLT1Q96NL6 688 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 DHX33Q9H6R0 707 aaKnown RBP20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 TECTAO75443 2155 aa20.76■□□□□ 0.91
UBE2D4-208ENST00000454350 WNT7AO00755 349 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 PER2O15055 1255 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 NDUFV1P49821 464 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 DNM2P50570 870 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 EPHA7Q15375 998 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 RHPN2Q8IUC4 686 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 C4orf19Q8IY42 314 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 LRRC43Q8N309 656 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 MRPS27Q92552 414 aaKnown RBP20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 PPP2R3CQ969Q6 453 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 CHST12Q9NRB3 414 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 RGL1Q9NZL6 768 aa20.75■□□□□ 0.91
UBE2D4-208ENST00000454350 ZNF318Q5VUA4 2279 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 ZBTB39O15060 712 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 JAK2O60674 1132 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 PHKA2P46019 1235 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 DUSP6Q16828 381 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 WASF1Q92558 559 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 NAP1L4Q99733 375 aaKnown RBP20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 LXNQ9BS40 222 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 TLE6Q9H808 572 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 DACT1Q9NYF0 836 aa20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 BARX2Q9UMQ3 279 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-208ENST00000454350 MEIS3P2A8K0S8 358 aa20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 KRT2P35908 639 aa20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 PDE12Q6L8Q7 609 aaKnown RBP20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 RNF169Q8NCN4 708 aa20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 HELQQ8TDG4 1101 aa20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 ZNF558Q96NG5 402 aa20.73■□□□□ 0.91
UBE2D4-208ENST00000454350 MUC6Q6W4X9 2439 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 HIDE1A8MVS5 230 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 SFPQP23246 707 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 NEK4P51957 841 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 TMEM184AQ6ZMB5 413 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 ABI1Q8IZP0 508 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 SLC39A11Q8N1S5 342 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 MICAL1Q8TDZ2 1067 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 DYDC2Q96IM9 177 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 CEP170P1Q96L14 293 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 NLRP4Q96MN2 994 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 MINDY3Q9H8M7 445 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 PPME1Q9Y570 386 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 COL4A3BPQ9Y5P4 624 aa20.72■□□□□ 0.91
UBE2D4-208ENST00000454350 DKC1O60832 514 aaKnown RBP eCLIP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 ZNF623O75123 536 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 SLITRK3O94933 977 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 YWHABP31946 246 aaKnown RBP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 CTTNQ14247 550 aaKnown RBP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 NCAPH2Q6IBW4 605 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 SLFN12Q8IYM2 578 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 PRPF31Q8WWY3 499 aaKnown RBP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 LPPQ93052 612 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 TMEM143Q96AN5 459 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 CDCA3Q99618 268 aaPredicted RBP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 HSD17B14Q9BPX1 270 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 TCF25Q9BQ70 676 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 INO80BQ9C086 356 aaPredicted RBP20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 FAM105AQ9NUU6 356 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 SPG21Q9NZD8 308 aa20.71■□□□□ 0.91
UBE2D4-208ENST00000454350 MYO10Q9HD67 2058 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 DCXO43602 365 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 ALADP13716 330 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 PPM1AP35813 382 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 RFC5P40937 340 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 PLPP4Q5VZY2 271 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 TWF2Q6IBS0 349 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms