RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 PLAGL2Q9UPG8 496 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
CSNK1E-211ENST00000451964 A0A0U1RQF3 1178 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 ITGB1P05556 798 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 BMP1P13497 986 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 DNAJB1P25685 340 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 MCM2P49736 904 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 RARRES1P49788 294 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 KCNQ1P51787 676 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 SPPL3Q8TCT6 385 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 HLA-CQ95604 372 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 CASD1Q96PB1 797 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 COG5Q9UP83 839 aa13.77□□□□□ -0.21
CSNK1E-211ENST00000451964 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 ARL2P36404 184 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 PTGDRQ13258 359 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 IL17AQ16552 155 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 ECM1Q16610 540 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 TCEAL5Q5H9L2 206 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 CATSPER4Q7RTX7 472 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 ASAP3Q8TDY4 903 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 TCP11Q8WWU5 503 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 P2RX5Q93086 422 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 MTRQ99707 1265 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 CWH43Q9H720 699 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-211ENST00000451964 COL4A4P53420 1690 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 MYO7AQ13402 2215 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 ASAP2O43150 1006 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 GAS2O43903 313 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 DGAT1O75907 488 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 CSPG5O95196 566 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 EOMESO95936 686 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 RPA1P27694 616 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 PHKA2P46019 1235 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 POTEGQ6S5H5 508 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 SRGAP1Q7Z6B7 1085 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 RNF149Q8NC42 400 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 TRAIPQ9BWF2 469 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 DACT1Q9NYF0 836 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 KIF3AQ9Y496 699 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
CSNK1E-211ENST00000451964 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 GLRA2P23416 452 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 IRS1P35568 1242 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 PTENP60484 403 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 CUL4AQ13619 759 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 CAPSQ13938 189 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 COL19A1Q14993 1142 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 UBXN11Q5T124 520 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 TWF2Q6IBS0 349 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 LPPQ93052 612 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 NACC1Q96RE7 527 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 NSUN3Q9H649 340 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 UBE2ZQ9H832 354 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 AGPAT5Q9NUQ2 364 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 DBR1Q9UK59 544 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
CSNK1E-211ENST00000451964 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 H3BQV1 296 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 HOXA2O43364 376 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 ZNF623O75123 536 aa13.73□□□□□ -0.21
CSNK1E-211ENST00000451964 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms