RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PORCNQ9H237 461 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 DIS3Q9Y2L1 958 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 KNDC1Q76NI1 1749 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF263O14978 683 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 DGAT1O75907 488 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ITGBL1O95965 494 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 LDHAP00338 332 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 ADH1AP07327 375 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 TM4SF4P48230 202 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 CYP2J2P51589 502 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 MRPS27Q92552 414 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 MRPL4Q9BYD3 311 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 UBN1Q9NPG3 1134 aa6.12□□□□□ -1.43
CDC42BPA-209ENST00000448940 AP1G2O75843 785 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 GJC1P36383 396 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 USP11P51784 963 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 EPHB1P54762 984 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 GSE1Q14687 1217 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 LPAL2Q16609 132 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TBC1D10CQ8IV04 446 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ACCSQ96QU6 501 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 CACYBPQ9HB71 228 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 SH3GLB2Q9NR46 395 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 INSL6Q9Y581 213 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ELP1O95163 1332 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 GAS2O43903 313 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRMT3O60678 531 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ACLYP53396 1101 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 CYP27A1Q02318 531 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 KYNUQ16719 465 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRIM60Q495X7 471 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NOSTRINQ8IVI9 506 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NUSAP1Q9BXS6 441 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 CYP4F11Q9HBI6 524 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRPV2Q9Y5S1 764 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 IFT172Q9UG01 1749 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 N4BP3O15049 544 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ASMTLO95671 621 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PDE6CP51160 858 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PLD1Q13393 1074 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 EPHA7Q15375 998 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TADA2BQ86TJ2 420 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TSNARE1Q96NA8 513 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 EMILIN3Q9NT22 766 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NDC80O14777 642 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 RRP8O43159 456 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PLEKHA8P1O95397 391 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF286BP0CG31 522 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 RCAN1P53805 252 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NELFCDQ8IXH7 590 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 DCP1BQ8IZD4 617 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 BANK1Q8NDB2 785 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 SGIP1Q9BQI5 828 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TMEM206Q9H813 350 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 SLC38A10Q9HBR0 1119 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRMT7Q9NVM4 692 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ANO10Q9NW15 660 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 BTBD18B2RXH4 712 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PFKMP08237 780 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PEX3P56589 373 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 CUL4BQ13620 913 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPA17Q15506 151 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 DUSP28Q4G0W2 176 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 C6orf132Q5T0Z8 1188 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 SYTL5Q8TDW5 730 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NFKBIZQ9BYH8 718 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TBC1D3BA6NDS4 549 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 CCDC175P0C221 793 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 RHBDL3P58872 404 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 RAD51Q06609 339 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 ALCAMQ13740 583 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 UVSSAQ2YD98 709 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 TEX35Q5T0J7 233 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 RDM1Q8NG50 284 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 FAM149B1Q96BN6 582 aa6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 POLR3FQ9H1D9 316 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-209ENST00000448940 NFIBO00712 420 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 RALAP11233 206 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 KLRC1P26715 233 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CASP7P55210 303 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 C16orf59Q7L2K0 433 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CCDC112Q8NEF3 446 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SPDYE1Q8NFV5 336 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 OR6B3Q8NGW1 331 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 TAF4BQ92750 862 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 GLMNQ92990 594 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ACAP3Q96P50 834 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 MXRA8Q9BRK3 442 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 BHMT2Q9H2M3 363 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 RIC8AQ9NPQ8 531 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ODF2LQ9ULJ1 636 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ITM2BQ9Y287 266 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.1□□□□□ -1.433e-7■□□□□ 10.3
CDC42BPA-209ENST00000448940 LOC102724159A0A0B4J2E5 919 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms