RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 NLRP4Q96MN2 994 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 JPH2Q9BR39 696 aaPredicted RBP17.63■□□□□ 0.41
NUP50-210ENST00000434760 GCOM2Q9BZD3 368 aaPredicted RBP17.63■□□□□ 0.41
NUP50-210ENST00000434760 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 COL4A3BPQ9Y5P4 624 aa17.63■□□□□ 0.41
NUP50-210ENST00000434760 ZBTB39O15060 712 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 HOXA2O43364 376 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.41
NUP50-210ENST00000434760 FGF18O76093 207 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 LYPLA2O95372 231 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 GLP2RO95838 553 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 ZSCAN20P17040 1043 aaPredicted RBP17.62■□□□□ 0.41
NUP50-210ENST00000434760 LAG3P18627 525 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 SFPQP23246 707 aaKnown RBP eCLIP17.62■□□□□ 0.41
NUP50-210ENST00000434760 RFC5P40937 340 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 DNM2P50570 870 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 POLGP54098 1239 aaPredicted RBP17.62■□□□□ 0.41
NUP50-210ENST00000434760 CDC42EP1Q00587 391 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 UBE3AQ05086 875 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 CTTNQ14247 550 aaKnown RBP17.62■□□□□ 0.41
NUP50-210ENST00000434760 EMC2Q15006 297 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 CALCRLQ16602 461 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 CEP170P1Q96L14 293 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 TMEM60Q9H2L4 133 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 XPNPEP1Q9NQW7 623 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
NUP50-210ENST00000434760 AGPAT5Q9NUQ2 364 aa17.62■□□□□ 0.41
NUP50-210ENST00000434760 TDRD15B5MCY1 1934 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 FSCN2O14926 492 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 NCK2O43639 380 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 PBX3P40426 434 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 PHKA2P46019 1235 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 GUCY1B3Q02153 619 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 TRIM29Q14134 588 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 CSPP1Q1MSJ5 1256 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 PUS10Q3MIT2 529 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 TMEM143Q96AN5 459 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 MSLNLQ96KJ4 702 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 HSD17B14Q9BPX1 270 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 EIF2AK1Q9BQI3 630 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 LLPHQ9BRT6 129 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 ZSWIM4Q9H7M6 989 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 MINDY3Q9H8M7 445 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 TLR9Q9NR96 1032 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 CHST12Q9NRB3 414 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 AAASQ9NRG9 546 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 PIN4Q9Y237 131 aaKnown RBP17.61■□□□□ 0.41
NUP50-210ENST00000434760 PCDHB12Q9Y5F1 795 aa17.61■□□□□ 0.41
NUP50-210ENST00000434760 POTEMA6NI47 508 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 MEIS3P2A8K0S8 358 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 SLITRK3O94933 977 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 EOMESO95936 686 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
NUP50-210ENST00000434760 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
NUP50-210ENST00000434760 EFHBQ8N7U6 833 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
NUP50-210ENST00000434760 PRPF31Q8WWY3 499 aaKnown RBP17.6■□□□□ 0.41
NUP50-210ENST00000434760 PSPC1Q8WXF1 523 aaKnown RBP17.6■□□□□ 0.41
NUP50-210ENST00000434760 TTC12Q9H892 705 aaPredicted RBP17.6■□□□□ 0.41
NUP50-210ENST00000434760 BAG4O95429 457 aaKnown RBP17.59■□□□□ 0.41
NUP50-210ENST00000434760 ERVFC1P60507 584 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 PLCB3Q01970 1234 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 ZP2Q05996 745 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 ADAM15Q13444 863 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 KCNT2Q6UVM3 1135 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 ABI1Q8IZP0 508 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 RNF169Q8NCN4 708 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 FAM105AQ9NUU6 356 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 CLEC1BQ9P126 229 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
NUP50-210ENST00000434760 MBTPS2O43462 519 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 MARCH6O60337 910 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 PPM1AP35813 382 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 NRIP1P48552 1158 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 SMAD4Q13485 552 aaKnown RBP17.58■□□□□ 0.4
NUP50-210ENST00000434760 CLUL1Q15846 466 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 XKR9Q5GH70 373 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 TWF2Q6IBS0 349 aaKnown RBP17.58■□□□□ 0.4
NUP50-210ENST00000434760 EP400NLQ6ZTU2 488 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 CATSPER4Q7RTX7 472 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.4
NUP50-210ENST00000434760 LPPQ93052 612 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 C8orf76Q96K31 380 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 ZNF558Q96NG5 402 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 MTRQ99707 1265 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 MRPL9Q9BYD2 267 aaKnown RBP17.58■□□□□ 0.4
NUP50-210ENST00000434760 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
NUP50-210ENST00000434760 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
NUP50-210ENST00000434760 C11orf16Q9NQ32 467 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms