RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 PRPF31Q8WWY3 499 aaKnown RBP24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 UHRF1Q96T88 793 aaPredicted RBP24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 IFT122Q9HBG6 1241 aa24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 CHST12Q9NRB3 414 aa24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 BMP2KQ9NSY1 1161 aaPredicted RBP24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 TYW1Q9NV66 732 aaKnown RBP24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 DACT1Q9NYF0 836 aa24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 COL4A3BPQ9Y5P4 624 aa24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 NCOR1O75376 2440 aa24.73■■□□□ 1.55
SEMA3B-205ENST00000434030 A0A0U1RQF3 1178 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 ST18O60284 1047 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 SFPQP23246 707 aaKnown RBP eCLIP24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 ZNF174Q15697 407 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 SPOUT1Q5T280 376 aaKnown RBP24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 PSPC1Q8WXF1 523 aaKnown RBP24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 CASD1Q96PB1 797 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 TMEM117Q9H0C3 514 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 HCSTQ9UBK5 93 aa24.72■■□□□ 1.55
SEMA3B-205ENST00000434030 POTEMA6NI47 508 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 TNFRSF10AO00220 468 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 HOXA2O43364 376 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 GAS2O43903 313 aaKnown RBP24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 DNAJB1P25685 340 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 EMC2Q15006 297 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 ZNF598Q86UK7 904 aaKnown RBP24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 NOSTRINQ8IVI9 506 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 TCP11Q8WWU5 503 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 CWH43Q9H720 699 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 UPF2Q9HAU5 1272 aaKnown RBP24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 ANKEF1Q9NU02 776 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 PCDHB12Q9Y5F1 795 aa24.71■■□□□ 1.55
SEMA3B-205ENST00000434030 EOMESO95936 686 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 SRGAP2CP0DJJ0 459 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 KCNA5P22460 613 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 LAMTOR4Q0VGL1 99 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 GNL2Q13823 731 aaKnown RBP24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 LRRC55Q6ZSA7 311 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 NECAB3Q96P71 396 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 MTRQ99707 1265 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 AAASQ9NRG9 546 aa24.7■■□□□ 1.54
SEMA3B-205ENST00000434030 ASAP2O43150 1006 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 CSPG5O95196 566 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 ATF7P17544 494 aaPredicted RBP24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 TECP42680 631 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 ORC2Q13416 577 aaPredicted RBP24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 COL19A1Q14993 1142 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 LEXMQ3ZCV2 418 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 TTC38Q5R3I4 469 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 CATSPER4Q7RTX7 472 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 FERMT3Q86UX7 667 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 RNF169Q8NCN4 708 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 POF1BQ8WVV4 589 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 PABPC5Q96DU9 382 aaKnown RBP24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 TRAIPQ9BWF2 469 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 XPNPEP1Q9NQW7 623 aa24.69■■□□□ 1.54
SEMA3B-205ENST00000434030 MUC3AQ02505 3323 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 A0A087WWV3 80 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 CD2BP2O95400 341 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 SPATA31C1P0DKV0 1188 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 U2AF2P26368 475 aaKnown RBP eCLIP24.68■■□□□ 1.541e-14■□□□□ 8.7
SEMA3B-205ENST00000434030 CLLU1OSQ5K130 101 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 TWF2Q6IBS0 349 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 SRGAP1Q7Z6B7 1085 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 ABI1Q8IZP0 508 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 COLGALT1Q8NBJ5 622 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 PIGOQ8TEQ8 1089 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 TMX3Q96JJ7 454 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 MINDY3Q9H8M7 445 aa24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 PIN4Q9Y237 131 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-205ENST00000434030 DGAT1O75907 488 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 OR52Z1P0C646 297 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 XRCC6P12956 609 aaKnown RBP eCLIP24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 PHKA2P46019 1235 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 TRAPPC10P48553 1259 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 RARRES1P49788 294 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 HYAL1Q12794 435 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 CATSPER3Q86XQ3 398 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 RNF149Q8NC42 400 aa24.67■■□□□ 1.54
SEMA3B-205ENST00000434030 NCK2O43639 380 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 MED24O75448 989 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 FGF18O76093 207 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 LAG3P18627 525 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 IRS1P35568 1242 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 EP400NLQ6ZTU2 488 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 C4orf32Q8N8J7 132 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 HELQQ8TDG4 1101 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 TBC1D32Q96NH3 1257 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 TUFT1Q9NNX1 390 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 AGPAT5Q9NUQ2 364 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 CLDND1Q9NY35 253 aa24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 NOL7Q9UMY1 257 aaKnown RBP24.66■■□□□ 1.54
SEMA3B-205ENST00000434030 SKIP12755 728 aa24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 GTF2F1P35269 517 aaKnown RBP eCLIP24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 TOB1P50616 345 aaPredicted RBP24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 UBE3AQ05086 875 aa24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 MXD4Q14582 209 aaPredicted RBP24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 NBR1Q14596 966 aa24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 CSPP1Q1MSJ5 1256 aa24.65■■□□□ 1.54
SEMA3B-205ENST00000434030 CTC1Q2NKJ3 1217 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms