RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ZSWIM4Q9H7M6 989 aa14□□□□□ -0.17
SMPD4-204ENST00000430682 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
SMPD4-204ENST00000430682 LYPLA2O95372 231 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 KCNA5P22460 613 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 PBX3P40426 434 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 DNM2P50570 870 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-204ENST00000430682 HYAL1Q12794 435 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 EMC2Q15006 297 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 RABEP1Q15276 862 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 PTPROQ16827 1216 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 PIGOQ8TEQ8 1089 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 LPPQ93052 612 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 P2RX5Q93086 422 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 NLRP4Q96MN2 994 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 UHRF1Q96T88 793 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-204ENST00000430682 PLVAPQ9BX97 442 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-204ENST00000430682 NSUN3Q9H649 340 aaKnown RBP13.99□□□□□ -0.17
SMPD4-204ENST00000430682 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 RWDD3Q9Y3V2 267 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 COL4A3BPQ9Y5P4 624 aa13.99□□□□□ -0.17
SMPD4-204ENST00000430682 TRIP11Q15643 1979 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 A0A0U1RQF3 1178 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 H3BQ06 376 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 LINC01565O15544 149 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 MED24O75448 989 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 POLGP54098 1239 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 LAMTOR4Q0VGL1 99 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 SAFBQ15424 915 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMPD4-204ENST00000430682 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 TIGD5Q53EQ6 642 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 ZNF410Q86VK4 478 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 NEK9Q8TD19 979 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 HELQQ8TDG4 1101 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 ASAP3Q8TDY4 903 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 POF1BQ8WVV4 589 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 LMAN2LQ9H0V9 348 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 CD320Q9NPF0 282 aa13.98□□□□□ -0.17
SMPD4-204ENST00000430682 TNFRSF10AO00220 468 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 DKC1O60832 514 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMPD4-204ENST00000430682 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMPD4-204ENST00000430682 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-204ENST00000430682 RFC5P40937 340 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 TECP42680 631 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 PHKA2P46019 1235 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 RARRES1P49788 294 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 ERVFC1P60507 584 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 ECM1Q16610 540 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 CTC1Q2NKJ3 1217 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 TTC38Q5R3I4 469 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 FAM43BQ6ZT52 329 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-204ENST00000430682 FERMT3Q86UX7 667 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 CATSPER3Q86XQ3 398 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 SLC7A3Q8WY07 619 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
SMPD4-204ENST00000430682 TBC1D32Q96NH3 1257 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 TMEM117Q9H0C3 514 aa13.97□□□□□ -0.17
SMPD4-204ENST00000430682 B4GALT3O60512 393 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 OR52Z1P0C646 297 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 IL9P15248 144 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 RBM10P98175 930 aaKnown RBP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 CDC42EP1Q00587 391 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 IL17AQ16552 155 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 AAK1Q2M2I8 961 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 LEXMQ3ZCV2 418 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 UBXN11Q5T124 520 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 OTUD6AQ7L8S5 288 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 CATSPER4Q7RTX7 472 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 PSPC1Q8WXF1 523 aaKnown RBP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 JPH2Q9BR39 696 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 CHST12Q9NRB3 414 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 CLDND1Q9NY35 253 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 PIN4Q9Y237 131 aaKnown RBP13.96□□□□□ -0.17
SMPD4-204ENST00000430682 PPME1Q9Y570 386 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 PCDHB6Q9Y5E3 794 aa13.96□□□□□ -0.17
SMPD4-204ENST00000430682 MYH11P35749 1972 aa13.96□□□□□ -0.18
SMPD4-204ENST00000430682 TBX10O75333 385 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 FGF18O76093 207 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 EOMESO95936 686 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMPD4-204ENST00000430682 ARL2P36404 184 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 CAPSQ13938 189 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 NAALADL2Q58DX5 795 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms