RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SUGCTQ9HAC7 445 aa17.68■□□□□ 0.42
MBD4-203ENST00000429544 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
MBD4-203ENST00000429544 CYP39A1Q9NYL5 469 aa17.68■□□□□ 0.42
MBD4-203ENST00000429544 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
MBD4-203ENST00000429544 DLG4P78352 724 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 GTF2BQ00403 316 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
MBD4-203ENST00000429544 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
MBD4-203ENST00000429544 C10orf76Q5T2E6 689 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 CCDC181Q5TID7 509 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 ALKBH5Q6P6C2 394 aaKnown RBP17.67■□□□□ 0.42
MBD4-203ENST00000429544 ANO5Q75V66 913 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 ZSWIM2Q8NEG5 633 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 RDM1Q8NG50 284 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 GABBR1Q9UBS5 961 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 AFG3L2Q9Y4W6 797 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 PCDHA10Q9Y5I2 948 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
MBD4-203ENST00000429544 F8VZ95 297 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 EVI5O60447 810 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 SORBS3O60504 671 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 RGS20O76081 388 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 KCNA2P16389 499 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 SOX5P35711 763 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 DNA2P51530 1060 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 SP4Q02446 784 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 DRAP1Q14919 205 aaPredicted RBP17.67■□□□□ 0.42
MBD4-203ENST00000429544 GPC2Q8N158 579 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 HSPBP1Q9NZL4 362 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 PCDHGC5Q9Y5F6 944 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 UTRNP46939 3433 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
MBD4-203ENST00000429544 ZNF572Q7Z3I7 529 aaPredicted RBP17.66■□□□□ 0.42
MBD4-203ENST00000429544 VPS36Q86VN1 386 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 C12orf56Q8IXR9 622 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 SENP7Q9BQF6 1050 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 STK33Q9BYT3 514 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 CCDC169A6NNP5 214 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 MAP2K7O14733 419 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 ANXA13P27216 316 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 SUPT20HL1Q3ZLR7 823 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 DLK2Q6UY11 383 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 INTS8Q75QN2 995 aaKnown RBP17.66■□□□□ 0.42
MBD4-203ENST00000429544 HDXQ7Z353 690 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.66■□□□□ 0.42
MBD4-203ENST00000429544 KIFC3Q9BVG8 833 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 ST6GALNAC4Q9H4F1 302 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 APEX2Q9UBZ4 518 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 NENFQ9UMX5 172 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 L1RE1Q9UN81 338 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 PTPRFP10586 1907 aa17.66■□□□□ 0.42
MBD4-203ENST00000429544 TARSL2A2RTX5 802 aaKnown RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 DDX3XO00571 662 aaKnown RBP eCLIP17.65■□□□□ 0.423e-6■■□□□ 14.5
MBD4-203ENST00000429544 ZNF862O60290 1169 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 VAMP7P51809 220 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 XXYLT1Q8NBI6 393 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 PACSIN2Q9UNF0 486 aaPredicted RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 MAFGO15525 162 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 ZMYND10O75800 440 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 SOX10P56693 466 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 ARHGAP44Q17R89 818 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 MMGT1Q8N4V1 131 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 SPATA4Q8NEY3 305 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 LNX1Q8TBB1 728 aaPredicted RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 CEP170P1Q96L14 293 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 GPR88Q9GZN0 384 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 HOXC10Q9NYD6 342 aa17.65■□□□□ 0.42
MBD4-203ENST00000429544 MYH9P35579 1960 aaKnown RBP17.65■□□□□ 0.42
MBD4-203ENST00000429544 GOLGA8IPA6NC78 632 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 GOLGA8JA6NMD2 632 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 USP2O75604 605 aaPredicted RBP17.64■□□□□ 0.42
MBD4-203ENST00000429544 PAFAH1B1P43034 410 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 MATR3P43243 847 aaKnown RBP eCLIP17.64■□□□□ 0.42
MBD4-203ENST00000429544 NPTX2P47972 431 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 PPP3CAQ08209 521 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 MEI1Q5TIA1 1274 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 SWSAP1Q6NVH7 229 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 BSNDQ8WZ55 320 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 MS4A14Q96JA4 679 aa17.64■□□□□ 0.42
MBD4-203ENST00000429544 JPH1Q9HDC5 661 aaPredicted RBP17.64■□□□□ 0.42
MBD4-203ENST00000429544 OTOFQ9HC10 1997 aa17.64■□□□□ 0.41
MBD4-203ENST00000429544 PSAPP07602 524 aa17.64■□□□□ 0.41
MBD4-203ENST00000429544 LMNB1P20700 586 aa17.64■□□□□ 0.41
MBD4-203ENST00000429544 MCM3P25205 808 aa17.64■□□□□ 0.41
MBD4-203ENST00000429544 OAS2P29728 719 aaKnown RBP17.64■□□□□ 0.41
MBD4-203ENST00000429544 NOP2P46087 812 aaKnown RBP17.64■□□□□ 0.41
MBD4-203ENST00000429544 GCLMP48507 274 aa17.64■□□□□ 0.41
MBD4-203ENST00000429544 DMP1Q13316 513 aaPredicted RBP17.64■□□□□ 0.41
MBD4-203ENST00000429544 OTUD6AQ7L8S5 288 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms