RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 GCOM2Q9BZD3 368 aaPredicted RBP17.29■□□□□ 0.36
SPC24-201ENST00000423327 CWH43Q9H720 699 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 COG5Q9UP83 839 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 PLAGL2Q9UPG8 496 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 COL4A3BPQ9Y5P4 624 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.28■□□□□ 0.36
SPC24-201ENST00000423327 ST18O60284 1047 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 MED24O75448 989 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 CSPG5O95196 566 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 COL19A1Q14993 1142 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 CLLU1OSQ5K130 101 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
SPC24-201ENST00000423327 PRPF31Q8WWY3 499 aaKnown RBP17.28■□□□□ 0.36
SPC24-201ENST00000423327 NECAB3Q96P71 396 aaPredicted RBP17.28■□□□□ 0.36
SPC24-201ENST00000423327 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
SPC24-201ENST00000423327 UBE2ZQ9H832 354 aaPredicted RBP17.28■□□□□ 0.36
SPC24-201ENST00000423327 A0A0U1RQF3 1178 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 OR52Z1P0C646 297 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 ZSCAN20P17040 1043 aaPredicted RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 IRS1P35568 1242 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 RARRES1P49788 294 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 LAMTOR4Q0VGL1 99 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 FERMT3Q86UX7 667 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 ASAP3Q8TDY4 903 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 PIGOQ8TEQ8 1089 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 PSPC1Q8WXF1 523 aaKnown RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 NSUN3Q9H649 340 aaKnown RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 ATP6V0A4Q9HBG4 840 aa17.27■□□□□ 0.36
SPC24-201ENST00000423327 TYW1Q9NV66 732 aaKnown RBP17.27■□□□□ 0.36
SPC24-201ENST00000423327 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 SFPQP23246 707 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPC24-201ENST00000423327 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPC24-201ENST00000423327 TECP42680 631 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 CDC42EP1Q00587 391 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 OTUD6AQ7L8S5 288 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 MTRQ99707 1265 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 TMEM117Q9H0C3 514 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
SPC24-201ENST00000423327 PCDHB6Q9Y5E3 794 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
SPC24-201ENST00000423327 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
SPC24-201ENST00000423327 GJB2P29033 226 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 PHKA2P46019 1235 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 TRAPPC10P48553 1259 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 HYAL1Q12794 435 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 ECM1Q16610 540 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 NAALADL2Q58DX5 795 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 RNF169Q8NCN4 708 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
SPC24-201ENST00000423327 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
SPC24-201ENST00000423327 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 ARL2P36404 184 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 PBX3P40426 434 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 CAPSQ13938 189 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 AAK1Q2M2I8 961 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 CATSPER4Q7RTX7 472 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 POF1BQ8WVV4 589 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 TCP11Q8WWU5 503 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 LPPQ93052 612 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 UHRF1Q96T88 793 aaPredicted RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
SPC24-201ENST00000423327 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 DACT1Q9NYF0 836 aa17.24■□□□□ 0.35
SPC24-201ENST00000423327 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
SPC24-201ENST00000423327 DGAT1O75907 488 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 KCNA5P22460 613 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 GLRA2P23416 452 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 LTBRP36941 435 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 FXR2P51116 673 aaKnown RBP eCLIP17.23■□□□□ 0.35
SPC24-201ENST00000423327 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 TWF2Q6IBS0 349 aaKnown RBP17.23■□□□□ 0.35
SPC24-201ENST00000423327 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
SPC24-201ENST00000423327 PABPC5Q96DU9 382 aaKnown RBP17.23■□□□□ 0.35
SPC24-201ENST00000423327 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms