RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CCDC69A6NI79 296 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 FSCN2O14926 492 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 CYTH3O43739 400 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 DUSP11O75319 330 aaKnown RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 BMP6P22004 513 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 NME2P22392 152 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 ADCYAP1R1P41586 468 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 LIFRP42702 1097 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 C19orf57Q0VDD7 668 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 KRT32Q14532 448 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 ADCK5Q3MIX3 580 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 RASIP1Q5U651 963 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 EEPD1Q7L9B9 569 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 RNF180Q86T96 592 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 HOMER1Q86YM7 354 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 SULF2Q8IWU5 870 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 CTCFLQ8NI51 663 aaPredicted RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 SYTL5Q8TDW5 730 aaPredicted RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 TCEANC2Q96MN5 208 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 NEK1Q96PY6 1258 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 PIGSQ96S52 555 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 LRRC2Q9BYS8 371 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 RIOX1Q9H6W3 641 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 VTA1Q9NP79 307 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 MRPL11Q9Y3B7 192 aaKnown RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 BAZ2BQ9UIF8 2168 aaKnown RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 SZT2Q5T011 3432 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 REC8O95072 547 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 PLEKHA8P1O95397 391 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 CALM1P0DP23 149 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 CALM2P0DP24 149 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 CALM3P0DP25 149 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 RXRAP19793 462 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 EDNRBP24530 442 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 ARNTP27540 789 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 CST5P28325 142 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 KIF5BP33176 963 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 HSPA4P34932 840 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 ARL4DP49703 201 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 GJA9P57773 515 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 EXOSC10Q01780 885 aaKnown RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 GHRHRQ02643 423 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 TNFAIP2Q03169 654 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SETDB1Q15047 1291 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 TAPT1Q6NXT6 567 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 AGMOQ6ZNB7 445 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SGMS1Q86VZ5 419 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 MCF2L2Q86YR7 1114 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 RAB11FIP4Q86YS3 637 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 TMTC2Q8N394 836 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 KLHDC9Q8NEP7 349 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 DNERQ8NFT8 737 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 TBC1D5Q92609 795 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 KCNB2Q92953 911 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 WNT8BQ93098 351 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 FERMT2Q96AC1 680 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 MAP3K14Q99558 947 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SPZ1Q9BXG8 430 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 MAF1Q9H063 256 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 UPF3AQ9H1J1 476 aaKnown RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 CAPN10Q9HC96 672 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 PDGFCQ9NRA1 345 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 COL20A1Q9P218 1284 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 ZMYND8Q9ULU4 1186 aaPredicted RBP7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SAMM50Q9Y512 469 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 PCDHA1Q9Y5I3 950 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
HMGN1-205ENST00000419378 A0A1W2PQ45 241 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 A0A1W2PQY0 241 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 CTAGE5O15320 804 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 ARHGEF15O94989 841 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 CFBP00751 764 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 PF4P02776 101 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SYN1P17600 705 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TFE3P19532 575 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 PTGS1P23219 599 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 GNAQP50148 359 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 HSD17B4P51659 736 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 ACLYP53396 1101 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 RTP1P59025 263 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 NKX3-2P78367 333 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TRAF1Q13077 416 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SNX17Q15036 470 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TRIM60Q495X7 471 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TMEM63BQ5T3F8 832 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 CCSAPQ6IQ19 270 aaPredicted RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 SLC39A5Q6ZMH5 540 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 NOL8Q76FK4 1167 aaKnown RBP7.98□□□□□ -1.13
HMGN1-205ENST00000419378 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 MICU3Q86XE3 530 aa7.98□□□□□ -1.13
HMGN1-205ENST00000419378 GALNT11Q8NCW6 608 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms