RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SP2Q02086 613 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MGAT3Q09327 533 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SAFBQ15424 915 aaKnown RBP eCLIP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 XRRA1Q6P2D8 792 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NOSTRINQ8IVI9 506 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LINC00301Q8NCQ3 95 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DCAF4Q8WV16 495 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RSAD2Q8WXG1 361 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ACSF2Q96CM8 615 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PGBD1Q96JS3 809 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 IWS1Q96ST2 819 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 BCAS3Q9H6U6 928 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 WNT16Q9UBV4 365 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LRFN2Q9ULH4 789 aa10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TBKBP1A7MCY6 615 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SPTLC1O15269 473 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SCG2P13521 617 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ADAM17P78536 824 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SPEM2Q0P670 501 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NPY5RQ15761 445 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CCDC183Q5T5S1 534 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 N4BP2L1Q5TBK1 243 aaPredicted RBP10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ARHGEF16Q5VV41 709 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TSHZ1Q6ZSZ6 1077 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DIS3L2Q8IYB7 885 aaKnown RBP10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ATRIPQ8WXE1 791 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MRPS27Q92552 414 aaKnown RBP10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NGRNQ9NPE2 291 aaKnown RBP10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TYW1Q9NV66 732 aaKnown RBP10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CDY2AQ9Y6F7 541 aa10.74□□□□□ -0.69
SOX9-AS1-201ENST00000412640 A0A1W2PQ27 194 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 A0A1W2PQ64 194 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 A0A1W2PQD8 194 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CYTH3O43739 400 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CLASP2O75122 1294 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PPP6R2O75170 966 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NR3C2P08235 984 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PARP1P09874 1014 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FAM102BQ5T8I3 360 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TRIM50Q86XT4 487 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FOXQ1Q9C009 403 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RIOX1Q9H6W3 641 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MLXIPQ9HAP2 919 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PUF60Q9UHX1 559 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KCNJ14Q9UNX9 436 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CACNA1IQ9P0X4 2223 aa10.73□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GOLGA6L4A6NEF3 574 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KLRF2D3W0D1 207 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PDHBP11177 359 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MYCLP12524 364 aaPredicted RBP10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 UBA1P22314 1058 aaKnown RBP10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CA8P35219 290 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 KRT2P35908 639 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SHC2P98077 582 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CSTF1Q05048 431 aaKnown RBP10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PTPAQ15257 358 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 OTOP3Q7RTS5 596 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DNAJB3Q8WWF6 145 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SPATA6Q9NWH7 488 aaPredicted RBP10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LZTS1Q9Y250 596 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CLIC4Q9Y696 253 aa10.72□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 hCG_1984214I3L0E3 225 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 SPTLC2O15270 562 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LAMTOR5O43504 91 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LIG1P18858 919 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms