RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 YWHAZP63104 245 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SCGB2A2Q13296 93 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRIQKQ629K1 86 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ANO7Q6IWH7 933 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PRPF40BQ6NWY9 871 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MCUQ8NE86 351 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CDC26Q8NHZ8 85 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 RACGAP1Q9H0H5 632 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 PCDHGB3Q9Y5G1 929 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MAGED1Q9Y5V3 778 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SH3D21A4FU49 640 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 MFAP3LO75121 409 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CLTBP09497 229 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CASP4P49662 377 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TAF5Q15542 800 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 IRAK1BP1Q5VVH5 260 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SMIM5Q71RC9 77 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ANKRD42Q8N9B4 389 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 BTBD6Q96KE9 485 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 AZI2Q9H6S1 392 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 CNNM2Q9H8M5 875 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 ZWILCHQ9H900 591 aa4.87□□□□□ -1.63
PTPN13-202ENST00000411767 HERC5Q9UII4 1024 aaKnown RBP4.87□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM43BA6NCK2 446 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SCGB2A1O75556 95 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RAD17O75943 681 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 HSPA4LO95757 839 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 FLT3P36888 993 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ARL4DP49703 201 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 HSPA2P54652 639 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PGBD2Q6P3X8 592 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DEF8Q6ZN54 512 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 C19orf35Q6ZS72 473 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 OTOAQ7RTW8 1153 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SLC51BQ86UW2 128 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DGKHQ86XP1 1220 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CDK20Q8IZL9 346 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 FAM172AQ8WUF8 416 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF285Q96NJ3 590 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CPSF3Q9UKF6 684 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC189A1A4V9 331 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 AP3D1O14617 1153 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 EIF3HO15372 352 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CYTH3O43739 400 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MGRN1O60291 552 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CPA3P15088 417 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SFNP31947 248 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 LSP1P33241 339 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DNM2P50570 870 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ACAP2Q15057 778 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NEK5Q6P3R8 708 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DAW1Q8N136 415 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC33Q8N5R6 958 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC54Q8NEL0 328 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SLC30A5Q8TAD4 765 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PPP1R13LQ8WUF5 828 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ACOT12Q8WYK0 555 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TXN2Q99757 166 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TBC1D22BQ9NU19 505 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RDH8Q9NYR8 311 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SH3BP4Q9P0V3 963 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 KLHL3Q9UH77 587 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SNX9Q9Y5X1 595 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEA13PA6NCF6 341 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 KPNA5O15131 536 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RTN3O95197 1032 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ASS1P00966 412 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CSN2P05814 226 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SYKP43405 635 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ARMC4Q5T2S8 1044 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 HECTD3Q5T447 861 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PRR23BQ6ZRT6 265 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CDC37L1Q7L3B6 337 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 KCNG4Q8TDN1 519 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PNKPQ96T60 521 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 LLPHQ9BRT6 129 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CLEC4AQ9UMR7 237 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CLCA2Q9UQC9 943 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 THRAP3Q9Y2W1 955 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SPDYE3A6NKU9 549 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 STMND1H3BQB6 276 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SUPT3HO75486 399 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MSL3P1P0C860 447 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PPP3CCP48454 512 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DRG2P55039 364 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NUP107P57740 925 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ASIC1P78348 528 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 AP3B2Q13367 1082 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 KRT39Q6A163 491 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PKN3Q6P5Z2 889 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 STAG2Q8N3U4 1231 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ANKRD44Q8N8A2 993 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC115Q96NT0 180 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TMEM60Q9H2L4 133 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms