RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 COL4A3BPQ9Y5P4 624 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 ARID2Q68CP9 1835 aa19.78■□□□□ 0.76
LSM5-204ENST00000409909 A0A0U1RQF3 1178 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 ITGB1P05556 798 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 SPATA31C1P0DKV0 1188 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 DNAJB1P25685 340 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 U2AF2P26368 475 aaKnown RBP eCLIP19.77■□□□□ 0.76
LSM5-204ENST00000409909 LAMTOR4Q0VGL1 99 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 AAK1Q2M2I8 961 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 TIGD5Q53EQ6 642 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 TCEAL5Q5H9L2 206 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 NEK9Q8TD19 979 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 ADAMTS19Q8TE59 1207 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 P2RX5Q93086 422 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 CASD1Q96PB1 797 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 XPNPEP1Q9NQW7 623 aa19.77■□□□□ 0.76
LSM5-204ENST00000409909 TYW1Q9NV66 732 aaKnown RBP19.77■□□□□ 0.76
LSM5-204ENST00000409909 SRGAP2CP0DJJ0 459 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 ATF7P17544 494 aaPredicted RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 TECP42680 631 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 TOB1P50616 345 aaPredicted RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 GNL2Q13823 731 aaKnown RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 NBR1Q14596 966 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 NAALADL2Q58DX5 795 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 TTC38Q5R3I4 469 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 LRRC55Q6ZSA7 311 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 ZNF598Q86UK7 904 aaKnown RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 C4orf32Q8N8J7 132 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 SPPL3Q8TCT6 385 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 PIGOQ8TEQ8 1089 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 INO80BQ9C086 356 aaPredicted RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 LMAN2LQ9H0V9 348 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 NSUN3Q9H649 340 aaKnown RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 CWH43Q9H720 699 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 UBE2ZQ9H832 354 aaPredicted RBP19.76■□□□□ 0.75
LSM5-204ENST00000409909 MINDY3Q9H8M7 445 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 CHST12Q9NRB3 414 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 ANKEF1Q9NU02 776 aa19.76■□□□□ 0.75
LSM5-204ENST00000409909 OR52Z1P0C646 297 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 SFPQP23246 707 aaKnown RBP eCLIP19.75■□□□□ 0.75
LSM5-204ENST00000409909 TRAPPC10P48553 1259 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 ORC2Q13416 577 aaPredicted RBP19.75■□□□□ 0.75
LSM5-204ENST00000409909 CLLU1OSQ5K130 101 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 CATSPER3Q86XQ3 398 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 RNF169Q8NCN4 708 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 TMEM117Q9H0C3 514 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 DACT1Q9NYF0 836 aa19.75■□□□□ 0.75
LSM5-204ENST00000409909 GAS2O43903 313 aaKnown RBP19.74■□□□□ 0.75
LSM5-204ENST00000409909 MED24O75448 989 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 CSPG5O95196 566 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 EOMESO95936 686 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 RARRES1P49788 294 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 COL19A1Q14993 1142 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 CATSPER4Q7RTX7 472 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 TCP11Q8WWU5 503 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 NECAB3Q96P71 396 aaPredicted RBP19.74■□□□□ 0.75
LSM5-204ENST00000409909 MTRQ99707 1265 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 TRAIPQ9BWF2 469 aa19.74■□□□□ 0.75
LSM5-204ENST00000409909 PIN4Q9Y237 131 aaKnown RBP19.74■□□□□ 0.75
LSM5-204ENST00000409909 ASAP2O43150 1006 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 HOXA2O43364 376 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 XRCC6P12956 609 aaKnown RBP eCLIP19.73■□□□□ 0.75
LSM5-204ENST00000409909 PHKA2P46019 1235 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 SPOUT1Q5T280 376 aaKnown RBP19.73■□□□□ 0.75
LSM5-204ENST00000409909 COLGALT1Q8NBJ5 622 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 RNF149Q8NC42 400 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 POLR3CQ9BUI4 534 aaPredicted RBP19.73■□□□□ 0.75
LSM5-204ENST00000409909 TUFT1Q9NNX1 390 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 NOL7Q9UMY1 257 aaKnown RBP19.73■□□□□ 0.75
LSM5-204ENST00000409909 PCDHB6Q9Y5E3 794 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 PCDHB12Q9Y5F1 795 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 PLXNA4Q9HCM2 1894 aa19.73■□□□□ 0.75
LSM5-204ENST00000409909 C5orf42Q9H799 3197 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 DGAT1O75907 488 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 KCNA5P22460 613 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 GJB2P29033 226 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 HOXA11P31270 313 aaPredicted RBP19.72■□□□□ 0.75
LSM5-204ENST00000409909 IRS1P35568 1242 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 ARL2P36404 184 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 HYAL1Q12794 435 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 TWF2Q6IBS0 349 aaKnown RBP19.72■□□□□ 0.75
LSM5-204ENST00000409909 SRGAP1Q7Z6B7 1085 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 HELQQ8TDG4 1101 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 ASAP3Q8TDY4 903 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 POF1BQ8WVV4 589 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 UHRF1Q96T88 793 aaPredicted RBP19.72■□□□□ 0.75
LSM5-204ENST00000409909 AGPAT5Q9NUQ2 364 aa19.72■□□□□ 0.75
LSM5-204ENST00000409909 RPA1P27694 616 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 GTF2F1P35269 517 aaKnown RBP eCLIP19.71■□□□□ 0.75
LSM5-204ENST00000409909 MCM2P49736 904 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 MXD4Q14582 209 aaPredicted RBP19.71■□□□□ 0.75
LSM5-204ENST00000409909 LEXMQ3ZCV2 418 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 LONRF3Q496Y0 759 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 ABI1Q8IZP0 508 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 LPPQ93052 612 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 PABPC5Q96DU9 382 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms